| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2688 |
|---|
| Symbol | |
|---|
| ID | 3918462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2927202 |
|---|
| End bp | 2927837 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640445465 |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | YP_497958 |
|---|
| Protein GI | 87200701 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGA AGGGCAGTTC CTCCCCCTCG CGTACCCGAA CCACCGTCGC CATCATTGCG
TGCATTGTCG CAGCGGTGGT TGGCGCGGTT CTGCTTGCGT GGGCGCTGCT CCAGGTCGAT
CTGCCTCCTT CGAGCGTCGA CGAGAATGGC CGCTACCGCC TTGTCGCGAC CGATGGTTCG
CTGTTCGACC GGGCCAGCCT GCGGGGGCGG CCCTATGTCA TATACTTCGG CTACACCAGC
TGTCCCGACC AGTGCCCCCT CATGCTGTCG CGACTGGCGC GGGCGAGGCA GGCGCTCGGA
CGGCGAGGCC GCGAACTGCG GATCGTGTTC ATCACCGTGG ACCCGCAGCG CGACACGCCC
GAAAAATTGC GCCGCTTCGT TCAGGAGATC GGCACGCCCA TCGTGGCGCT TACCGGCAGT
CCCGAGGTGA TCCAGAAGGT CGCCGACAGC GCGGCGATCT ACGTCAGGCG CAATGATTCC
GCGTTGATCG GCTACACGAT CGAGCACACG ACCAACGCCT TGATTTACAG CCGCGATGAT
GAGTTTCGCG ACACGATCTC GCCGGCGGAC AGCGACGCCG AAGTCCTGGC GAAGCTGCGC
GCGGAGCTGG ACCGCCCTCA GGAAGCCGGA CGGTAG
|
|---|
| Protein sequence | MSRKGSSSPS RTRTTVAIIA CIVAAVVGAV LLAWALLQVD LPPSSVDENG RYRLVATDGS
LFDRASLRGR PYVIYFGYTS CPDQCPLMLS RLARARQALG RRGRELRIVF ITVDPQRDTP
EKLRRFVQEI GTPIVALTGS PEVIQKVADS AAIYVRRNDS ALIGYTIEHT TNALIYSRDD
EFRDTISPAD SDAEVLAKLR AELDRPQEAG R
|
|---|
| |