Gene Saro_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2679 
Symbol 
ID3918453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2917053 
End bp2918192 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content66% 
IMG OID640445456 
Productphosphoserine aminotransferase 
Protein accessionYP_497949 
Protein GI87200692 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01365] phosphoserine aminotransferase, Methanosarcina type
[TIGR01366] phosphoserine aminotransferase, putative 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTA CGATTCCGGC TCGCAAGCCT GCGCGCCCCT TCTTCTCGTC CGGTCCCTGC 
GCCAAGCCGC CCGGATACTC CCCCGAAAAG CTCGCCACCG AATCGCTCGG CCGCTCGCAT
CGCGCCAAGA TCGGCAAGAC GCGCCTTCAG TACTGCATCG ACCTGATGCG CGAAGTGCTG
CAGCTTCCCG ATACGCATCG CATCGGCATC GTGCCGGGTT CGGACACCGG CGCTTTCGAG
ATGGCGATGT GGACGATGCT GGGTGCCCGC CCGGTGACGA CGCTTGCCTG GGAATCGTTC
GGTGAAGGTT GGGTCACCGA TGCCGCCAAG CAGCTCAAGC TCGATCCCAC GGTGCTGCGC
GCCGACTATG GCCAGATCCC CGATCTGAAC GCGATCGACT GGTCGAACGA CGTGCTGTTC
ACCTGGAACG GCACGACTTC GGGCGTGCGC GTGCCGAACG CCGATTTCAT CCCCGCCGAC
CGCGAGGGCC TGGCCTTCGC CGACGCCACT TCGGCGGTTT TCGCCTACGA CATCGACTGG
TCGAAGATCG ACGTCGCCAC CTTCTCCTGG CAGAAGGTGC TGGGCGGCGA AGGCGGCCAC
GGCGTGCTGA TCCTCGGCCC CCGCGCTGTC GAACGGCTTG AAACCTACAC CCCTGCCTGG
CCGCTGCCCA AGGTGTTCCG CCTCGTGTCC AAGGGCAAGC TCGCCGAGGG CGTGTTCAAG
GGCGAAACGA TCAACACCCC CTCGATGCTC GCGGTCGAAG ACGCGATCTT CGCGCTCGAA
TGGGCAAAGG GTCTTGGCGG TCTCGAAGGC CTCCAGGCAC GCAGCGATGC CAATGCGGCG
GCGCTGAACA AGATCGTCGA AGAACGCTCG TGGCTCTCGC ACCTCGCCGC CGACGAAGCG
ACCCGGTCGA AGACCTCGGT CTGCCTCTCG GTCGAAGGCG CGGATGCCGA CTTCATCAAG
AAGTTCGCAG GCCTGCTCGA AAAGCAGGGC GCGGCCTATG ACATCGCCGG TTACCGCGAT
GCCCCGGCCG GCCTGCGCAT CTGGTGCGGC GCGACCGTCA ATGCCGAGGA CATCGCCGAT
CTCGGTCCGT GGCTCGACTG GGCCTACGAG ACGACCAGGG CCGAACTGGC CGCCGCCTGA
 
Protein sequence
MSATIPARKP ARPFFSSGPC AKPPGYSPEK LATESLGRSH RAKIGKTRLQ YCIDLMREVL 
QLPDTHRIGI VPGSDTGAFE MAMWTMLGAR PVTTLAWESF GEGWVTDAAK QLKLDPTVLR
ADYGQIPDLN AIDWSNDVLF TWNGTTSGVR VPNADFIPAD REGLAFADAT SAVFAYDIDW
SKIDVATFSW QKVLGGEGGH GVLILGPRAV ERLETYTPAW PLPKVFRLVS KGKLAEGVFK
GETINTPSML AVEDAIFALE WAKGLGGLEG LQARSDANAA ALNKIVEERS WLSHLAADEA
TRSKTSVCLS VEGADADFIK KFAGLLEKQG AAYDIAGYRD APAGLRIWCG ATVNAEDIAD
LGPWLDWAYE TTRAELAAA