| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2658 |
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| Symbol | |
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| ID | 3918432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2895710 |
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| End bp | 2897635 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640445435 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_497928 |
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| Protein GI | 87200671 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGGCTGC GCTTCTGGTC CGAATGGGAG CAGCGCGAAG GCGACGGTTT CACCAGGGCC
TACGGGCACA GTCTCTCGCA TCGCCTGCCG TTGCTTTACC TGGTGGTCGT GTTCGACGCC
TGGCTGATGG CGTTCCGGTT CTGGGCGGTC GCGCCGCATT GGCTTGCGCT GTTCGGCCCC
GTGATCCTGG GCAACTTCGC TTTGTGGCGA GCGTTGTACT GGATGCCGGG AAAGGTGTCG
CGGCGCTCGC TCGGCAGGCT TCGGCGCGAT CTGAAGGTCA TGAGCTGGGT CGGGGCCGTG
TCTGGCTTCA TGTTCGCACT CTGGGTCATG GTGCTGTACC CGCTGGGGGA CAGGTCGGCG
CAGTCGTTCG TTCATTACAT CGTCGCGGTG ACCCTGTTCT CCGGCATCCT CGGGCTGGGC
CATTCGCCGA TGACCGCGCT GCGCATCGCG ATCGCCACGA CCATTCCGAC CACCGGGCAG
GTACTGTTCA GCGGACACCC TAACGCTGTC CCGGTCGTTC TGGTTCAGAT CATCGTCACC
TTCATCCTGC TCCTGATAAC CAACGGGCAT CATCGCGATT TCGTGCGTCT CGAGCTTTCC
CGACAGCAGC TTGTCCGGCG CGAGCGCGAG GCGGCCCAGA TGGCGCAGCA CAACCTCCTG
CAGGCCACGA TCGACCCGCT GACCGGCGCG TTGAACCGTC GCGCGGTGCT GGCGCGGCTG
GAGGAGGAAC TGACGGCGGG CGGCAGAGGC GCAGAGCCAG CCTGGCTGGC GCTGCTCGAC
CTCGACGGTT TCAAGCACAT CAACGACACC TATGGCCATG CGGCCGGAGA CGCGGTACTG
GCCGCGGTGG CGGCGCGACT CGCCGCGCTC GAACGCGTTC GCTGTTACGG CCGCCTGGGG
GGCGACGAGT TTGCCGCCAT CCTCGATCCC GCGTTGAGCG AAGAGGCGGT GCGCTCGCTT
GCCGACGCCT TGTCCGATTC GCTGCGGGCG CCGGTCCTTC ACGCGGGTGC CATTCTACGC
CTGTCCGGCT CGATCGGCGT GCATCGCATC GTCGGGCGCA ATGCCAGCGA CTGCCTCGAG
CGGGCGGACG CGGCACTGTA CAAGGCCAAG GAGCAGTCCG ACGGCACCGT CGTGGTATTC
AGTCCCGACG ATGAAGTGGC GTTGCAGGAT CGCGCGGCGA TCACGCGCCA GTTCAACGAC
AGCGACCTCG AACAGCGCCT GAAACTTGTT TACCAGCCCA TTATCGACGT CGAGAGTGGC
CGCACGACCG GTTTCGAGGC GTTCGTCCGG TGGAGCCCGG ACGGTCAGCG CTGGCTTGCG
CCCGGGCAAT TCATGTCGCT TGCCGAAGCG ACCGGGCGGA CGGGCGAGCT TACCCGCATG
GTCATGTCCC GTGCATTGGC GGAATGCCGT GCATGGGAGG ATGGCCGCAC CCTTTCGATC
AACCTGGCCC CACGCGATGT CATGCGCGCA GGGACGGCCG ATGCGCTCGC CCGCATTGCG
GAGGACGCCG GCGCGCCGCC GCATTCGATC ATTCTGGAAG TGACCGAACG GGCGCTGCTC
GACGATCCGA GGCGCGCCGA GGACCAGCTC CGCGCCTTCC GGGCCCGTGG CTTCCGCATC
GCGCTCGACG ATTTCGGCGC CGGCTGGTCC AGCCTCAGTC AGGTCCACCG CCTCCCGCTC
GACATGATCA AGATCGACCA GGAGCTGTCG CGCGCGCTGG TCAGCGATCC CGGTGCGAGG
ACTCTCGTGA GCACGATCAT TTCGCTGTCA TGGCAGCTCG GTATCGACTG CACGATCGAG
GGCGTGGAGG AAGAGGCGCA GGCCGCCACG GCCCGCGCGC TCGGCATCCG CCTGATGCAG
GGCTATTACT TCGGGCGGCC GGACGAGGCC GAGCAGGTAC TGTCGAACCT CGCCCGCGTC
GCCTGA
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| Protein sequence | MGLRFWSEWE QREGDGFTRA YGHSLSHRLP LLYLVVVFDA WLMAFRFWAV APHWLALFGP
VILGNFALWR ALYWMPGKVS RRSLGRLRRD LKVMSWVGAV SGFMFALWVM VLYPLGDRSA
QSFVHYIVAV TLFSGILGLG HSPMTALRIA IATTIPTTGQ VLFSGHPNAV PVVLVQIIVT
FILLLITNGH HRDFVRLELS RQQLVRRERE AAQMAQHNLL QATIDPLTGA LNRRAVLARL
EEELTAGGRG AEPAWLALLD LDGFKHINDT YGHAAGDAVL AAVAARLAAL ERVRCYGRLG
GDEFAAILDP ALSEEAVRSL ADALSDSLRA PVLHAGAILR LSGSIGVHRI VGRNASDCLE
RADAALYKAK EQSDGTVVVF SPDDEVALQD RAAITRQFND SDLEQRLKLV YQPIIDVESG
RTTGFEAFVR WSPDGQRWLA PGQFMSLAEA TGRTGELTRM VMSRALAECR AWEDGRTLSI
NLAPRDVMRA GTADALARIA EDAGAPPHSI ILEVTERALL DDPRRAEDQL RAFRARGFRI
ALDDFGAGWS SLSQVHRLPL DMIKIDQELS RALVSDPGAR TLVSTIISLS WQLGIDCTIE
GVEEEAQAAT ARALGIRLMQ GYYFGRPDEA EQVLSNLARV A
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