Gene Saro_2625 details

Gene Information

• Locus tag: Saro_2625
• ID: 3917040
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2840827
• End bp: 2842776
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640445384
• Product: acetyl-coenzyme A synthetase
• Protein accession: YP_497895
• Protein GI: 87200638
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGAGG CAGTCTATCC TGTACCGGCT GAGTGGGCGC AGAACGCGCT GGTCGACGAG 
GCGCGCTACC AGGATATGTA TCGCCAGTCG GTCGACGATC CCGAAGGCTT CTGGGCCGAA 
CACGGCAAGC GGATCGATTG GATCAGGCCT TTCACCAAGG TCAAGAACAC CTCGTTTCAC 
GAAGCCGACT TCGGCATCCG CTGGTTCGAG GACGGCACGC TCAACCTCGC CGCGAACTGC 
CTCGACCGTC ACCTCGCCGA ACGCGGCGAC GAGATCGCGA TCCTGTGGGA GCCCGACAGC 
CCCGACGAGG CACACCGCGA GATCACCTAC CGCCAGCTCC ACGCCGATGT CTGCCGCTTT 
GCCAACCTGC TGAAGGCCAA GGGCGTCCAG AAGGGCGAGC GCGTCACCAT CTACCTGCCG 
ATGGTGCCGG AAGCCGCCGT GGCGATGCTG GCCTGCGCCC GCATCGGCGC GATCCATTCC 
ATCGTCTTTG CAGGCTTCAG CCCGGATGCG CTGGCCGGCC GCATCACCGA CTGCGACAGC 
CGCATCGTCC TCACCTCGGA CGAAGGCCTG CGCGGCGGAC GCAAGGTTCC GCTGAAGGCC 
AATGTGGACG AGGCGCTGAA GCAATGCCCC GGCGTCGACA CCGTGATCAT GCTGCGCCGC 
ACGGGCGCCG ACGTGGACTT TGTCGAAGGC CGCGACATCG ACTGGGCAAC GGCAGTCGCC 
GAGCAGAGCG CCGATTGCCA GCCCGAGGAA ATGAACGCGG AAGACCCGCT GTTCATCCTC 
TACACCTCCG GCTCTACCGG AAAGCCCAAG GGCGTGCTGC ACACGACGGG CGGCTATTCG 
GTCTGGGCGT CGATGACGCA CCAGTACGTG TTCGATTACC GTCCCGGGCA GATCTACTGG 
TGCGCGGCCG ACATCGGCTG GGTCACCGGC CACTCCTATG TCGTCTACGG ACCGCTCATG 
AACGGCGCCA CTACGGTCAT GTTTGAAGGC GTGCCGAACT TCCCGGACGC AAGCCGCTTC 
TGGCAGGTGG TCGACAAGTT CAAGGTCGAA ATCTTCTACG GCGCCCCTAC CGCGCTGCGC 
GCCCTGATGC GCGAGGGCGA CGAATGGGTG AAGAAGACGA GCCGCGCCTC GCTGCGCCTG 
CTTGGTTCGG TGGGCGAACC GATCAATCCC GAAGCCTGGG AATGGTATCA CAAGGTCGTA 
GGCGACAGTC GCTGCCCGAT CGTCGACACC TGGTGGCAGA CCGAAACCGG CGGGGCGATG 
ATCACCCCGC TACCGGGCGC GACCGCGCTC AAGCCCGGCT CGGCCTCGCG CCCGTTCTTC 
GGCGTAAAGC CCGCGCTTGT CGATAACGAC GGCACGTTCC TTGAAGGCGC GACTGACGGG 
TGCCTCGTAG TGACCGATAG CTGGCCCGGC CAGATGCGCA CCGTGTGGGG CGATCACGAG 
CGGTTCTTCC AGACCTATTT CACCACTTTC AAGGGCCTGT ACTTCACCGG CGACGGATGC 
CGCCGCGACG AGGACGGCTA CTACTGGATC ACCGGCCGCA TCGACGACGT GATCAACGTG 
TCGGGCCACC GCATGGGAAC GGCGGAAATC GAAAGCGCGC TGGTCGCCCA CCCGAAGGTG 
GCCGAAGCTG CGGTCGTCGG CATGCCGCAC GACATCAAGG GCCAGGGCAT CTACGCCTTC 
GTCACCTGCA ATGCCGAAAT CGAGCCCGAC GACCTGCTGC GCAAGGAGTT GATCCAGTGG 
GTCCGCCACG AAATCGGCCC CATCGCCACG CCGGACGTGA TCCAGTTCGC TCCCGGTCTG 
CCCAAAACCC GTTCGGGCAA GATCATGCGC CGCATCCTGC GCAAGATCGG CGAGAACGAC 
GTCTCCAACC TTGGCGACAC GTCGACCCTT GCCGATCCGT CGGTTGTCGA TAATCTGCTG 
GCCAACAGAC CGCAGCTCGC AGGGGCTTGA 

 

Protein sequence

MGEAVYPVPA EWAQNALVDE ARYQDMYRQS VDDPEGFWAE HGKRIDWIRP FTKVKNTSFH 
EADFGIRWFE DGTLNLAANC LDRHLAERGD EIAILWEPDS PDEAHREITY RQLHADVCRF 
ANLLKAKGVQ KGERVTIYLP MVPEAAVAML ACARIGAIHS IVFAGFSPDA LAGRITDCDS 
RIVLTSDEGL RGGRKVPLKA NVDEALKQCP GVDTVIMLRR TGADVDFVEG RDIDWATAVA 
EQSADCQPEE MNAEDPLFIL YTSGSTGKPK GVLHTTGGYS VWASMTHQYV FDYRPGQIYW 
CAADIGWVTG HSYVVYGPLM NGATTVMFEG VPNFPDASRF WQVVDKFKVE IFYGAPTALR 
ALMREGDEWV KKTSRASLRL LGSVGEPINP EAWEWYHKVV GDSRCPIVDT WWQTETGGAM 
ITPLPGATAL KPGSASRPFF GVKPALVDND GTFLEGATDG CLVVTDSWPG QMRTVWGDHE 
RFFQTYFTTF KGLYFTGDGC RRDEDGYYWI TGRIDDVINV SGHRMGTAEI ESALVAHPKV 
AEAAVVGMPH DIKGQGIYAF VTCNAEIEPD DLLRKELIQW VRHEIGPIAT PDVIQFAPGL 
PKTRSGKIMR RILRKIGEND VSNLGDTSTL ADPSVVDNLL ANRPQLAGA