| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2619 |
|---|
| Symbol | |
|---|
| ID | 3917034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2833398 |
|---|
| End bp | 2834120 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640445378 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_497889 |
|---|
| Protein GI | 87200632 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTC CCTCGATCGT ACTGGTTGAA GATGACGGGC CGCTGCGCAC GCTGACCGCA
CGCGCGCTGC GCGAGAACGG CTACACCGTC CGCACTGCCG CAACCGGCGC CGAAATGTGG
GTCGCGCTGG AAAGCGAGCC TGCCGATCTG GTCGTGCTCG ACATCATGCT GCCTGGCACC
AGCGGCATCG AACTGTTCCG CCGCCTTCGC CGGCAGAGCG ACGTACCCAT CATCTTCGTT
TCCGCTCGCG GCAGCGAAGA GGATCGCGTA CTCGGTCTCG AACTTGGCGC CGACGATTAC
CTGCCAAAGC CCTTCAGCAC GCGCGAACTG GTCGCCCGCA TCGGCGCAGT CCTGCGGCGC
GGCCAAGTGA ACGGCACCGA CACGTCCGGC GATACGGGCA GCCGCAGCGG CGACATCCGC
TTCGAAGGCT GGACCGTCTC GATGGCGCGG CGCGAACTCC ATTCGCCGAG CGGCGCGATG
GTCGACCTGA CCGGAGCGGA GTTCGATCTC CTCGCGACGT TCATCAGCCA GCCCCAGCGC
GTACTTGGCC GCGAGCGATT GATAGAGCTC TCTCGCACCC GGCTGGGCGA CAGCTCGGAT
CGCAGCGTCG ACGTCCTCGT CAGCCGCCTC CGCCGCAAGC TGTCCGCTGC GGGGGGCAAT
GCACCGATCG TCACGGTGCG CGGCGTTGGC TATATGTTCA GGGCCGAGGT CGCGCGCAGT
TGA
|
|---|
| Protein sequence | MQSPSIVLVE DDGPLRTLTA RALRENGYTV RTAATGAEMW VALESEPADL VVLDIMLPGT
SGIELFRRLR RQSDVPIIFV SARGSEEDRV LGLELGADDY LPKPFSTREL VARIGAVLRR
GQVNGTDTSG DTGSRSGDIR FEGWTVSMAR RELHSPSGAM VDLTGAEFDL LATFISQPQR
VLGRERLIEL SRTRLGDSSD RSVDVLVSRL RRKLSAAGGN APIVTVRGVG YMFRAEVARS
|
|---|
| |