| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2611 |
|---|
| Symbol | |
|---|
| ID | 3917026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2823727 |
|---|
| End bp | 2824686 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640445370 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_497881 |
|---|
| Protein GI | 87200624 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCCAG AATGCGCAAA GCTTCCGACT TTTCTCAGGA CAGTGCATGA AGATGTCGAT
GCGCAGGCCA GAAGCCTCTT CACGCTCGAC CAGAACTACA TGCAGGTCGA TCCGGGGCCG
TTCTGCGGGA CCATGGCCAC CTGCGATTTC GGCACCGGCC TCGTCGTCTC GTTCGAACAG
GTGAACAAGC GCGTGCTGCA GGTCGCGGCT GTTCCTTTCG GCACCGCACA GGTCGCGCTG
ATACTCGAGG CGGGCGAGCC GACGACCCAC AACCAGGTCG GGCGGATCCG GAACGCGGGG
GTAGTCATGG CCCCCGGTGC CGAAGCGCGC CTGAGCGCGG GCGCCAACAC CCGCGTCTGC
CTGATTTCCA TCGCCGGAGA GGCGGCCGAT CACCTGCGGT CACGTTACAA CTTCGATCCC
GACAGCTTGC GCGCAGACAT CTTCCTCGAT CCGGCGGAAA CCACCGCGCT GCGCGGGCTC
GTGACCGAGG CCTACCAGCG CTTCAGCAGT CCCCAGGCCG ACAGGTCATT CGACCAGGCA
AGCGCCGCCG CCTTTCACGA GGCGGTGCTC AGTGTGACCG CGTGGACATG CGCCAGTTCG
GCCAGGACGC AGAACCAGCA CCGCGTCGCG GGGGATTGCC GCACCACTGC GCTGACCGCC
GCGATCAGGC TGATCGACCA CAACCTTCAC AACCCGGTCA CCGTCGAATG GCTCGCCAGG
ACGCTGGGCG TCAGCCGCCG GTCGCTCGAA CAGGCGTTCG GCGAAGCTTT CGACACCTCG
CCCGGCCGCT ACATCAAGGT GCTGCGGCTC AATTCGCTGC GCCAGATGCT GCGCGATCCG
TCCAATGCCG AGGTCAGCAT CGGCGATCTG GCCGCACGCT GCGGGCTTTG GCACCAGGGG
CGGCTCGCCA GCGAGTTCCG CGAACTGTTC GGCGTCCTGC CCTCCGAAGC GCGCGGTTAG
|
|---|
| Protein sequence | MYPECAKLPT FLRTVHEDVD AQARSLFTLD QNYMQVDPGP FCGTMATCDF GTGLVVSFEQ
VNKRVLQVAA VPFGTAQVAL ILEAGEPTTH NQVGRIRNAG VVMAPGAEAR LSAGANTRVC
LISIAGEAAD HLRSRYNFDP DSLRADIFLD PAETTALRGL VTEAYQRFSS PQADRSFDQA
SAAAFHEAVL SVTAWTCASS ARTQNQHRVA GDCRTTALTA AIRLIDHNLH NPVTVEWLAR
TLGVSRRSLE QAFGEAFDTS PGRYIKVLRL NSLRQMLRDP SNAEVSIGDL AARCGLWHQG
RLASEFRELF GVLPSEARG
|
|---|
| |