Gene Saro_2587 details

Gene Information

• Locus tag: Saro_2587
• ID: 3917001
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: -
• Start bp: 2791974
• End bp: 2793791
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640445345
• Product: GTP-binding protein LepA
• Protein accession: YP_497857
• Protein GI: 87200600
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0481] Membrane GTPase LepA
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01393] GTP-binding protein LepA

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACC TCGCGCTTAT CCGCAATTTC TCCATCATCG CCCATATCGA CCACGGCAAG 
TCGACGCTGG CGGATCGCCT GATCCAGTAC ACCGGCGGCC TTACCGAGCG CGAGATGTCC 
GAGCAGGTTC TCGACAACAT GGACATCGAG AAGGAGCGCG GGATCACCAT CAAGGCGCAG 
ACCGTACGCC TCGATTACAC GGGCAAGGAC GGCAAGACCT ATCAGCTCAA CCTGATGGAC 
ACGCCGGGCC ACGTCGACTT CGCCTATGAA GTGAGCCGCA GCCTTGCCGC CTGCGAGGGC 
GCGCTGCTGG TGGTGGACGC GGCGCAGGGT GTCGAGGCGC AGACGCTGGC CAACGTCTAC 
CAGTCGATCG AACACGACCA CGAGATCGTG CCGGTCATCA ACAAGATCGA CCTTCCGGCC 
GCCGAACCGG AAAAGGTCAA GGCCGAGATC GAGGACGTGA TCGGCCTGGA TGCCAGCAAC 
GCGGTGCTGA CGAGCGCCAA GTCGGGCATC GGCATCGAGG AGGTTCTGGA CGCCGTGGTC 
GAGCGCATTC CGCCGCCCAA GGGCGACCGC AGCGCGCCGT TGAAGGCGAT GCTGGTGGAC 
TCCTGGTACG ACCCCTATCT CGGCGTAGTC ATCCTCGTGC GCGTGATCGA TGGCGTCATC 
AGGAAAGGCC TCCAGGTCAA GTTCATGGCC GGCGGGACCG AGCACCTGAT CGACCGCGTG 
GGCTGCATGC GCCCCAAGAT CGAGACGCTG GACGAACTGG GGCCGGGCGA GATCGGCTTC 
ATCACCGCGC AGATCAAGGA AGTGGCGCAG GCGCGCGTCG GTGACACGAT CACGACGGTG 
AAACAGGGCG CAAGCGAAGC GCTGCCGGGC TTCAAGGAAG TGCAGCCCGT GGTGTTCTGC 
GGCATCTTCC CGGTCGACGC CGCCGATTTC GAGAAGCTGC GCGAAAGCAT TGCGAAGCTG 
CGCCTCAATG ATGCCTCGTT CAGCTTCGAG ATGGAATCGA GCGCGGCGCT GGGCTTCGGC 
TTCCGCTGCG GTTTCCTCGG ACTGCTGCAC CTGGAAATCA TCCAGGAGCG CCTGAGCCGC 
GAATACGACC TCGACCTGAT CACCACTGCG CCGTCGGTGG TCTATCGCAT CCAGCTTCGC 
GCCAGCCGAA ACGACGACGC GCGCGAGATA CTGCTGCACA ATCCGGCGGA CTATCCGGAC 
CCCAGCCGGA TCGAGACCAT CGAGGAGCCG TGGATCAAGG GCACGATCTA CACCCCCGAC 
GAATACCTCG GCTCGGTTCT CAAGCTGTGC CAGGATCGCC GCGGCATCCA GACCGGCCTG 
ACCTATGTCG GCGGGCGTGC GCAGGTGACC TATGAACTGC CGCTCAACGA AGTGGTGTTC 
GATTTCTACG ACCGTCTGAA GTCGATCAGC AGGGGCTATG CCTCGTTCGA CTACGAGCAG 
GTCGGCCTGC GCGAGGGCGA TCTCGTCAAG ATGAGCATCC TCGTCAACAA CGAGCCGGTC 
GATGCGCTTT CGATGATCGT CCACCGCAGC GCCGCCGAGG CGCGCGGGCG GCACATGTGC 
GAGCGCCTCA AGGACCTGAT CCCGCGTCAC CTGTTCAAGA TCCCGATCCA GGCGGCCATC 
GGCGGCAAGG TCGTCGCGCG CGAGACGATC AGCGCGATGC GCAAGGACGT GACCGCCAAG 
TGCTATGGCG GCGACATCAC CCGCAAGAAG AAGCTTCTGG AAAAGCAGAA GAAGGGCAAG 
GCCCGCATGC GCGAGTACGG CAACGTATCA ATCCCGCAGG AAGCCTTCAT CGCCGCGCTG 
CGGATGGGCG AGGAATAA 

 

Protein sequence

MTDLALIRNF SIIAHIDHGK STLADRLIQY TGGLTEREMS EQVLDNMDIE KERGITIKAQ 
TVRLDYTGKD GKTYQLNLMD TPGHVDFAYE VSRSLAACEG ALLVVDAAQG VEAQTLANVY 
QSIEHDHEIV PVINKIDLPA AEPEKVKAEI EDVIGLDASN AVLTSAKSGI GIEEVLDAVV 
ERIPPPKGDR SAPLKAMLVD SWYDPYLGVV ILVRVIDGVI RKGLQVKFMA GGTEHLIDRV 
GCMRPKIETL DELGPGEIGF ITAQIKEVAQ ARVGDTITTV KQGASEALPG FKEVQPVVFC 
GIFPVDAADF EKLRESIAKL RLNDASFSFE MESSAALGFG FRCGFLGLLH LEIIQERLSR 
EYDLDLITTA PSVVYRIQLR ASRNDDAREI LLHNPADYPD PSRIETIEEP WIKGTIYTPD 
EYLGSVLKLC QDRRGIQTGL TYVGGRAQVT YELPLNEVVF DFYDRLKSIS RGYASFDYEQ 
VGLREGDLVK MSILVNNEPV DALSMIVHRS AAEARGRHMC ERLKDLIPRH LFKIPIQAAI 
GGKVVARETI SAMRKDVTAK CYGGDITRKK KLLEKQKKGK ARMREYGNVS IPQEAFIAAL 
RMGEE