Gene Saro_2579 details

Gene Information

• Locus tag: Saro_2579
• ID: 3916993
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2783100
• End bp: 2783786
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640445337
• Product: OmpW
• Protein accession: YP_497849
• Protein GI: 87200592
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3047] Outer membrane protein W
• TIGRFAM ID: [TIGR03304] outer membrane insertion C-terminal signal

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.793769
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAGC TGCTTACCGC CGCACTCCCC GTCATTATCG CCGCTGCCGC GCTGGCTCCG 
GCACCTGCCC TTGCAGGTTC GACCGAGGGC AAGCTGCAGG TGAAGGTGCT CGGCACCGGC 
GTTCTGCCGG ACGGCAAGAT CGTCGACGTG AAGTACGATC CGCTCGGCCT GACCGACGGC 
GCGCAGACCA GGGCGAACGA CAATGTCGTT CCGACGATCG CCATCGAGTA TTTCTTCACG 
CCCAACATCT CGGCCGAGAC GATCTGCTGC CTGACGCAAC ACCACGTGAG CGGCGCGGGC 
ACGCTCGAGG GCGCGGACCA TATCGTCGAC CATGTGCTGG TACTTCCGGC CACGCTAACG 
CTGAAGTACC ATCTGCCGCT GGAAGGCGGG ATCAAGCCCT ACATCGGCGC GGGGCCGTCG 
ATGTTCCTCT ACTTCGGCGA AAAGCCGGGT TCGAGCATCA CCCCGCTTGG CGTCGACAAG 
GTGAAGATGT CCAACGACCT CGGCTTTGCG CTACAGGCCG GCGTCGACAT CCCGGTCAAC 
GACAAGGGCC TGGGCGTGAC GCTCGATGCC AAGAAGTACT TCATGGACAC CACCGCCCAC 
TTCTACGTGA GCGGGACCGA AGTGCTCACC ACCAAGCACT CGCTCGATCC TTGGGTGGTG 
AGCGCGGGGC TGTCCTACCG CTTCTGA 

 

Protein sequence

MKKLLTAALP VIIAAAALAP APALAGSTEG KLQVKVLGTG VLPDGKIVDV KYDPLGLTDG 
AQTRANDNVV PTIAIEYFFT PNISAETICC LTQHHVSGAG TLEGADHIVD HVLVLPATLT 
LKYHLPLEGG IKPYIGAGPS MFLYFGEKPG SSITPLGVDK VKMSNDLGFA LQAGVDIPVN 
DKGLGVTLDA KKYFMDTTAH FYVSGTEVLT TKHSLDPWVV SAGLSYRF