Gene Saro_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2560 
Symbol 
ID3916882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2762385 
End bp2763197 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID640445318 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_497830 
Protein GI87200573 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.786122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCA CCGTGACCCG CAAGATCGAC CTGCTCGACA CCGCGCCGCG CTTTACCGAG 
ACGGACGCGA TCCGCCTCAA CAACCTGTTC CGGGGCACCG ACACGCACGA CATGCTGCGT
TCGGTGATCC GCGACGGGCT GGCGGGCGAC CTCGCGGTCG TGTCGAGCTT CGGCGCGGAA
AGCGCGGTGC TGCTCCACCT GATCGCCGAA GTCGACCCTT CGGTGCCGGT CCTGTTTCTC
GAAACGGGCA AGCATTTCCG CGAGACCGTT GCCTATCGCG ACGAGTTGAT CGGCTTCCTG
GGCATGACCA ACCTGCAGAT CATCGAACCC GACGCGGCGG TCATCGCCAA GAAGGACGAG
AACGGGCTGC GCTGGTCCTG GGACCCGGAT GGCTGCTGCG AGATCCGCAA GGTCGAGCCG
CTGGCCAGGG CCCTGCTCCA CTTCGATGCA TCGATCACCG GCCGCAAGGG CTTCCAGTCG
AAGACCCGCG CAGGGCTTCC ACGGTTCGAG ATCGACCGTT CGGACGCGCA AGGACGGTTG
AAGATCAACC CGCTCGCGTC ATGGGACAAG ACCATGCTCG AGGCCTATTT CGCAGAGCAT
GGCTTGCCGC CGCATCCGCT GGTCGCGCAG GGCTATCCCT CGATCGGCTG CGCGCCCTGC
ACCAGCAAGG TTGCCCCCGG TGAAGACCCG CGCTCGGGCC GCTGGAAGGG CTGGGACAAG
ACCGAATGCG GCATCCATTC GCCCACCGAC GACGAAGCCG CAGGCAAGAA GCCTGGCGAC
GAACTGCCCC CAGGATACGA ACCGGTCTTC TGA
 
Protein sequence
MDSTVTRKID LLDTAPRFTE TDAIRLNNLF RGTDTHDMLR SVIRDGLAGD LAVVSSFGAE 
SAVLLHLIAE VDPSVPVLFL ETGKHFRETV AYRDELIGFL GMTNLQIIEP DAAVIAKKDE
NGLRWSWDPD GCCEIRKVEP LARALLHFDA SITGRKGFQS KTRAGLPRFE IDRSDAQGRL
KINPLASWDK TMLEAYFAEH GLPPHPLVAQ GYPSIGCAPC TSKVAPGEDP RSGRWKGWDK
TECGIHSPTD DEAAGKKPGD ELPPGYEPVF