Gene Saro_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2546 
Symbol 
ID3916867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp2749923 
End bp2750567 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID640445303 
ProductPadR family transcriptional regulator 
Protein accessionYP_497816 
Protein GI87200559 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.242238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTCG AACGTGGCCG CGACAATTGC GGCCGGAACG GCGCCGGGTT TGATCGGCGT 
GCCGCCAGGA TGATGGCGAT GATGGGCGGG CGCTTCGGCG GCGGTCCCTT TGGCGAAGGC 
GGGCCCTTCG GCGAAGGGCG TGGCTTTGGC GGTCATGGCG GGGGCGGCGG CAGGGGCCGG 
CGCGGCGGGC GGATGTTCGC CGGCGGCGAG CTTCGCCTGC TGCTTCTGCA CCTTGTCGCC 
CAGCAGCCGC GCCACGGCTA TGACCTGATC CGTGCGGTGG GCGAACTGGC CGGCGGCGAA 
TATGCGCCCA GCCCCGGTGT GGTCTATCCG ACGCTCAGCC TGCTGGTGGA CGAAGGGCTG 
ATTGCCGAGG AAGCCGGCGA CGGCCCGCGC AAGGCGTTTG CCGCAACCGA TGCGGGCCGC 
ACCGAGCTCG ATGGCAGGAG CGACGAACTC GACGCCATCG TCGCGCGGCT CAAGGCACTG 
GGCGACCAGG GTGAGCGCTC GGCCAGTCCG CCGGTACGCC GCGCGATGGG CAATCTTCAC 
GCCGTGCTGC GCAATCGCGC CATGGCCGAA GGTTTCGACA CCGAGACGGC CCATGCCATC 
GCCGACATCC TCGACGAGGC CGCGCGCCGG ATCGAAAGGC TTTGA
 
Protein sequence
MHFERGRDNC GRNGAGFDRR AARMMAMMGG RFGGGPFGEG GPFGEGRGFG GHGGGGGRGR 
RGGRMFAGGE LRLLLLHLVA QQPRHGYDLI RAVGELAGGE YAPSPGVVYP TLSLLVDEGL 
IAEEAGDGPR KAFAATDAGR TELDGRSDEL DAIVARLKAL GDQGERSASP PVRRAMGNLH 
AVLRNRAMAE GFDTETAHAI ADILDEAARR IERL