| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2500 |
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| Symbol | |
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| ID | 3916821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 2700925 |
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| End bp | 2702313 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640445257 |
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| Product | hypothetical protein |
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| Protein accession | YP_497770 |
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| Protein GI | 87200513 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2342] Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase |
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| TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.967827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGGA CGGGAATGTA TGTTCTGCAG GGAATTGTTC CTTCGGAAAT TGCTGTAGCT
CCGTTTGATG TCAAGGTAAT AGACATCTAC AACGATGACG GCGTAGCTTT CACGCCCACG
CAGGTTGCGC AGATGGGCGG CGGACCGGGC AGTGCATTAC TTCTCGGATA CTTCAGCATT
GGTGAAGCAG AGGTCTATCG AGACTACTTC AACACCATTC CGAAATCGGC CCTCGGACCT
GAAAATCCAC AGTGGGCCGG TAACTATCAG GTCGCCTACT GGACGGCCGA ATGGCGCACC
GTGGCAACCG CCTACATCGA CCGGATCATC GCTGCCGGCT ATGATGGCGT CTACTTCGAC
GTCGTCGACG AATACCAGCA GAAGTGGGCG CAGACCTATT GCCCGGGCGG CGCGGCAGGT
GCCGAACAAG CCATGGCGGA TCTGGTCGCC TACCTCGCCG ACTATGCCCA TGCCAAGAAC
CCGGCGTTCA AGATCTGGGC AAACAACGCC GAGGAACTGC TGACCAACCA GACATATTTC
AGCCACCTCG ACGGCATGTT CAAGGAGAAC CTGTTCTATA CGGACAGCGG TTCGAAGCAG
CCTTCGAGCG AGACGCAGTA CAGCATGAGC CTCCTCCAGA TGATGCTGGC GGCGGGCAAG
GATGTCATCG CCATCGAGTA CGTTTCGGAC TCGGCAAAGA TCGCCGACGT GGAAACGCAG
GCCGCGCACT ACAACGTCGG CTACTACACC GCGGACATCA ATCTCGACGG CATCAGCTAT
ACCGGCGTGC TGCCCGGCCA GTACATCCAC GAAGACTGGA GCGGTCTGAC GACGACCACG
ACGACGACCA GCACCAGCAC CACCTCTACG TCGACAACCA CCTCCACCAC GACAACGTCG
ACCACCACGC TGGTGACCGA TCTCACCCTG ACCGGGACGA GCAGTTCCGA CAACCTGGCT
GGCAAGTCCG GCAACGACAA GCTCTACGGC AAAGCCGGTG CCGACGTGCT GTCAGGCAAC
GGCGGCAACG ACTGGCTCGA AGGCGGCAAC GGCAACGACA AGCTTGCCGG CGGCGCGGGA
GCGGACTCCT TCGTGTTCCG CGCCTATGGC AACAAGCACA GGGACGCGAT CGCCGACTAC
CAGGCCGGCA CGGACCATAT CGTGCTCGAC CACGCGGTGT TCACTGCGGC GGGCGCCATC
GGCACCTTGA GCGATGCCGG ATTCTGGATC GGATCGGCAG CCCACGATGC CAGCGACCGG
ATCATCTACA ACGCATCCAC TGGATTGATC AGCTACGATG CGGACGGCAC CGGCAGACTC
TCGGCCGTCG CCATCGCCAC CGTCGCGCCC GGCACGCTGC TGACGCATGC CGACTTCCTG
ATCATCTGA
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| Protein sequence | MARTGMYVLQ GIVPSEIAVA PFDVKVIDIY NDDGVAFTPT QVAQMGGGPG SALLLGYFSI
GEAEVYRDYF NTIPKSALGP ENPQWAGNYQ VAYWTAEWRT VATAYIDRII AAGYDGVYFD
VVDEYQQKWA QTYCPGGAAG AEQAMADLVA YLADYAHAKN PAFKIWANNA EELLTNQTYF
SHLDGMFKEN LFYTDSGSKQ PSSETQYSMS LLQMMLAAGK DVIAIEYVSD SAKIADVETQ
AAHYNVGYYT ADINLDGISY TGVLPGQYIH EDWSGLTTTT TTTSTSTTST STTTSTTTTS
TTTLVTDLTL TGTSSSDNLA GKSGNDKLYG KAGADVLSGN GGNDWLEGGN GNDKLAGGAG
ADSFVFRAYG NKHRDAIADY QAGTDHIVLD HAVFTAAGAI GTLSDAGFWI GSAAHDASDR
IIYNASTGLI SYDADGTGRL SAVAIATVAP GTLLTHADFL II
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