Gene Saro_2485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2485 
Symbol 
ID3916805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp2687106 
End bp2687813 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID640445241 
Productpeptidase M50 
Protein accessionYP_497755 
Protein GI87200498 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.904327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCCGG AAGGTCTCCT GTGGCAGGTC GCGACGATCG CGATTCCCAT GATCCTTGCC 
ATCGTGTTCC ATGAAGTTGC CCACGGCTGG ACGGCGCGGG CGCTTGGCGA TCCCACGGCG 
GCGGAACAGC GGCGGTTGAG TCTCAACCCC TTGCGTCACG TCGATCCGTT CGGGACGATC 
ATCCTGCCCG GCCTGCTGAA GTTGACCGGC GCGCCGGTGT TCGGTTGGGC GAAGCCGGTT 
CCGGTCAATT TCAACCGCTT GCGCAATCCG CGCTGGGGAA TGGTCGCCGT GGCGGCGGCG 
GGGCCGGCGA TGAACTTCGT TCTGGCGACG CTTTCCGCAA TCGCGCTTGG CCTGCTGGTC 
AGGGCGACGG ATCTGGGCGG AGAGCCGGGG CTGGGCGTGC TGTTCCTTTC GGACAACCTG 
CGCAACTTCC TGATCGTGAA CCTTTTCCTT GGCGCGTTCA ACTTGCTGCC GATCCCCCCG 
TTCGACGGTT CGCGGATCGT CATGGGCGTG CTTCCCGCGC CGCTGGCGAG GGGATATGCC 
CGGATCGAGC CTTTCGGTCT GCTCGTGGTC TTTGGACTTC TCGTTATTCT TCCGTATCTT 
GCGCCGAACC TTCATCTCGT GGAGCGGCTG ATCGGCCCGC CGGTCGACTG GCTGGGACAG 
CAGCTCGCCA ATCTCGCGGT GGCGGTTGCC GGGCCGGAGC CGATCTGA
 
Protein sequence
MNPEGLLWQV ATIAIPMILA IVFHEVAHGW TARALGDPTA AEQRRLSLNP LRHVDPFGTI 
ILPGLLKLTG APVFGWAKPV PVNFNRLRNP RWGMVAVAAA GPAMNFVLAT LSAIALGLLV 
RATDLGGEPG LGVLFLSDNL RNFLIVNLFL GAFNLLPIPP FDGSRIVMGV LPAPLARGYA 
RIEPFGLLVV FGLLVILPYL APNLHLVERL IGPPVDWLGQ QLANLAVAVA GPEPI