Gene Saro_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2467 
Symbol 
ID3916786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2662662 
End bp2663654 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content59% 
IMG OID640445222 
Producthomocysteine S-methyltransferase 
Protein accessionYP_497737 
Protein GI87200480 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTGGGC ACGGTTGTGC TTCCATGCTA AATTGCCGCG TCAACCGTGA TCGAGAGGGC 
GCGATGGCAC TGGCGAAGCT ACCACAGCTT GAGAGCGTAT TTCTGACTGA TGCCGGCCTT
GAGACCGACT TCATCTTTAA CCGCGGCATC GATCTGCCAT ACTTCGCCTC AATCACCCTG
CTTCAGTCGA GCGATGGAAA GATTGCCCTT GAAGAGTACT TTCGCGGCTT TCTCGAGCTC
GCTCGGCGCA TGCGATGCGG CCTGATTCTG GAAAGCGCCA CATGGCGCGC AAGCCCGGAC
TGGGCTGAAC CGCTCGGTTT GTCGCAGCAA GAGCTCGATA CGTTGAACAC GAGTGCAATC
GCGATCCTGC GAGATCTGCG CGACGAATTT GGATCAACCA TGCCTGCAGT CGTGATCAGT
GGGTGCCTTG GGCCGAGGGG CGACGGGTAT GATCCTGGCA AGATCATGTC CGAGGAAGGA
GCGGAAGCCT ATCATCGCCA CCAAGCTGAG GTACTCGCCT CGGCCGGCGT GGACCAGTTG
ACCGCGATCA CGATGACTAA CGTGCCCGAG GCAATCGGGA TTGCAAAGGC AGCGAAGAGT
CTGGCGGTAC CAGTCGCGAT CAGCTTTACT GTCGAGACCG ACGGAAGGCT CCCCACCGGC
GACAGGCTCT CTGATGCTCT GCGTGCGGTT GACCAGGCGA CGGCTTCAAC CCCGGCCTAT
TACATGATCA ACTGCGCACA TCCCAGCCAC TTCGCTGCCG TACTCGAGGA TGGGGCCGAC
TGGGTAAACC GGATTGGTGG GTTGAGGGCA AATGCGTCTC GGTGCAGCCA TGCCGAGGTA
GATGCCATGA GCGAGCTTGA TCGGGGCAAT CCTGAGGAAC TTGCGGCTCT GCATTCCGAA
CTTCGGCTGC GGTTTCCGCA CATCAACGTG CTCGGAGGCT GCTGCGGCAC TGATCTTGAT
CACATCACCG CGATCGCAGA GGCCTGCCTG TAG
 
Protein sequence
MLGHGCASML NCRVNRDREG AMALAKLPQL ESVFLTDAGL ETDFIFNRGI DLPYFASITL 
LQSSDGKIAL EEYFRGFLEL ARRMRCGLIL ESATWRASPD WAEPLGLSQQ ELDTLNTSAI
AILRDLRDEF GSTMPAVVIS GCLGPRGDGY DPGKIMSEEG AEAYHRHQAE VLASAGVDQL
TAITMTNVPE AIGIAKAAKS LAVPVAISFT VETDGRLPTG DRLSDALRAV DQATASTPAY
YMINCAHPSH FAAVLEDGAD WVNRIGGLRA NASRCSHAEV DAMSELDRGN PEELAALHSE
LRLRFPHINV LGGCCGTDLD HITAIAEACL