| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2458 |
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| Symbol | |
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| ID | 3916777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2649885 |
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| End bp | 2652161 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640445213 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_497728 |
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| Protein GI | 87200471 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAC GTCTTCGGGC AATTTGCCTT GCGCCTCTGG GGGCCGCACT GGTCCTCCCG
GCAGCCGCCC ACGCACAGTC GGCGCAGGCC GGTGATGCAG CCGACTCCTC GGCTCCTTCC
ACAGCCGAAA TCATTGTCAC CGCAACGAAG CAGAATACCG CGCTCAGCCG CGTTGCTGCT
GCCGTTACTG CCGTGACTGC GGCGGATATC GGTCCCGGCG GCGTCCAGAA CGTGGGAGAC
CTGCAGGTTG TCGTGCCGAA CGTTTCGATC GGCGATCAGT TCGGCGTCAA CCGTACCTTC
ATTCGCGGCG TCGGCCTGAA CAACTTCGAT GTCGGCGGGG AAGGCGCGGT CGCGTTCCTC
CAGAACGGCG CAATCCTGGC GCGTCCGGCC CAGCAGCTCA GTGGCTTCTT CGACCTTTCC
CAGATCGAAG TCCTGCGCGG ACCGCAGTCG ATCCTTTACG GTCGCGGCGC CACTGCTGGC
GCGATCAATC TCGTTACCGC AGCTCCGACC GACGAGATGG ACGGGTATCT GCGAGCCACC
TATGGCAACT ATGACAACCG GGTGCTTGAA GGCGCGATCG GCGGTCCGCT CGCGGGCGAC
CGCTTGATGG TGCGCCTCGC CGGCAAGTAT GAAAAGCGCG ACGGTTACGG CGTCAACCTT
TTCACCGGTA ATCCGGTCGA TGACCGCGAT GCCTATTCCT TGCGCGCTAC CGTGGTCGCC
AAGCTCAGCG ATACGTTCAA GGCGACGATC GTTGGCGATC ATTTCAAGGA AGACGACAAC
AATTATGCCT TCCACTATTT CGGTCCGTCG GTAATTCCCG AAGCAGGGCT GTTCCACAAG
TTCATCGGTG GCAAGTCGAT CTTCGACTAT TACGCCGCGC GCAACGAAAA GCCCAACCTG
CGCAATATCT ATTCCGATGA AGAGGCGATC AACAACCGCA AGGGCTATGG CGTGACCGGC
ACGCTCGACT GGGACCTGGG CGCTGCATCG GTCAAGTCGA TCACCGCCTA CCGCACATTC
GACCGTTTCC AGCGCGACGA CCTCGACGTG TCCGACGTCA ATCTTGCCGG CCAGAACAAC
TACGTCGAAA AGAGCCGCGC CTTCAGCCAG GAAGTCACAG TCAACTACGA AGGCGATGGT
TTCACACTGC TCGGCGGTGC GATGTACCTG CACGAGAAGT TGACTGGGCA GGTGCTCGTG
CCGACCGTGA ACCTCGGCGT CCTGTTCGGC CTGCCGGCCG ATACGTTCGA CGATGGCGCC
TACGAGCAGA ACGGACTGGT CAAGATCGAT GCCGTCGGCG TCTATCTCCA GGGTGCGGTC
GATCTCAGCC CCACGATCAA GCTCACCGCC GGCGCGCGCT ACAACTATGA GCATCGCAAG
GGTGATGGCT ACTTCCGCTT CGATGCGCTC GGCGTGAACA TTCCGACCGA CAAGTCCAAG
GGTTGGTCCT CGGTTACGCC GAAGGTGTTG CTGGAGTTCA AGCCGACTGA CCGCACGCTC
CTCTACGCAA GCGTCACAAA GGGCTTCAAG TCGGGCGTCA TCAACATCGG CAGCGTCGAT
GCGGCGATCG ATCCAGAAAC GGTCTGGAGC TACGAAGCGG GCTTCAAACA GAAGCTGGCG
GACAATCGCG TCCTGCTCAG CGGTGCGGTG TTCTACTACG ATTACAAGAA CCTGCAGGTC
AGCTTCGTCA ACGCCAACTC GATCGTGCAG ACGATCAATG CGGCAAACGC GCGCAACTAC
GGCGGCGAGC TGGAGCTTGA AGGCAAGATC ACGCCGCAGT TCTCCGTGAA CCTCAACGCG
TCCTACCTCA ATGCTCAGTT CACGAAGTTC TGCAACGCCT ACTACGGCGC GGCCTTCCCG
GCGCGGTCCG GCATTTCCTA TCCGGTTTGC CCCACCGATT CCGGCCTCGT CGACCTCAGC
GGAAAGCGCC TTCCGAACGC GCCGCGCTTC ACCGTTGGCG GTGGCTTCAA CTGGGACATC
CCGCTGGGCA ACGACAGCCG CCTTGCCGTC AACGGCGAGA TCAAGTGGCA GTCGAAGGTC
TACTTCACCG AGTTCAACAA TCGCGATGCG GAACAAGGTT CCTATGCCAT GGCGAATGCC
GGTCTGACCT GGCACGCACC GGGCGACCGC TTCTCGATCG GCGGGTGGGT GAAAAACATC
ACCAACGAGT TCGTGATTGC GAACAACATC ATCACTGCCG CCACGTTCGC CTATGTCCGC
GTCGGCTCGG TCATGCCGCC GCGCACCTAC GGGGTGACTG CCAGCGTGAA TTTCTGA
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| Protein sequence | MKRRLRAICL APLGAALVLP AAAHAQSAQA GDAADSSAPS TAEIIVTATK QNTALSRVAA
AVTAVTAADI GPGGVQNVGD LQVVVPNVSI GDQFGVNRTF IRGVGLNNFD VGGEGAVAFL
QNGAILARPA QQLSGFFDLS QIEVLRGPQS ILYGRGATAG AINLVTAAPT DEMDGYLRAT
YGNYDNRVLE GAIGGPLAGD RLMVRLAGKY EKRDGYGVNL FTGNPVDDRD AYSLRATVVA
KLSDTFKATI VGDHFKEDDN NYAFHYFGPS VIPEAGLFHK FIGGKSIFDY YAARNEKPNL
RNIYSDEEAI NNRKGYGVTG TLDWDLGAAS VKSITAYRTF DRFQRDDLDV SDVNLAGQNN
YVEKSRAFSQ EVTVNYEGDG FTLLGGAMYL HEKLTGQVLV PTVNLGVLFG LPADTFDDGA
YEQNGLVKID AVGVYLQGAV DLSPTIKLTA GARYNYEHRK GDGYFRFDAL GVNIPTDKSK
GWSSVTPKVL LEFKPTDRTL LYASVTKGFK SGVINIGSVD AAIDPETVWS YEAGFKQKLA
DNRVLLSGAV FYYDYKNLQV SFVNANSIVQ TINAANARNY GGELELEGKI TPQFSVNLNA
SYLNAQFTKF CNAYYGAAFP ARSGISYPVC PTDSGLVDLS GKRLPNAPRF TVGGGFNWDI
PLGNDSRLAV NGEIKWQSKV YFTEFNNRDA EQGSYAMANA GLTWHAPGDR FSIGGWVKNI
TNEFVIANNI ITAATFAYVR VGSVMPPRTY GVTASVNF
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