| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2438 |
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| Symbol | |
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| ID | 3916757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2621275 |
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| End bp | 2623953 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640445193 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_497708 |
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| Protein GI | 87200451 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.615124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACCC CGCGGCTTGC CACCTTGCTG CTGCTTTCCA CCGCGCTTTC CATGCCTGCA
CTCGCGCAGG CGCAGGAAGC GACTCCGTCC GCGACGGCGG AGACCGTCGC CCCGCAGGAC
GATACCGGCA CCGCTGCCGA CGCGGCACCG CAGGAGCAGG CGCCCGAAAT CTCTGTCCCC
GGGGGCGAAA TCATCGTCAC CGGCCAGCGC GAACGCAACG TCCAGCGCGC TGCCGCGCAG
GTCGTGTCGG TCCTTGGCAC GGCTGAAATC GCACGCACCG GCGAAGGCAA CATCGCAGGC
GCGCTGGGCC GCGTCACAGG CCTCAGCGTC GTCGGCAACG GCTACGTCTA CGTTCGCGGC
CTTGGCGACC GCTATTCACT CGCGTTGCTG AACGGCTCGC CCCTGCCAAG CCCCGAGCCG
CTCAAGCGCG TGGTCCCGCT CGACCTTTTC CCGTCGAGCA TCATCGCCTC GTCGCTGGTG
CAGAAGTCCT ACTCGGTGAA CTATCCGGGT GAGTTCGGCG GCGGCGTCGT CAACCTCACG
ACCAAGGCCG TCCCTCAGGA CGCCTTCATC CAGGTCGGGG GCGGCATTTC CGCCGATACC
GAGACCACAA ACCAGCTCGG CTATACATAC TATGGGTCGA GCACCGACTG GACCGGCTTC
GACAACGGGC AGCGCGACTA CACGAGCGCG CTCAAGTCGT TCCTCGCCAG CGGCGATCGC
ATCAGCGGCG GCACGGTCGA TGCCAACGCG CTGGCGCAGG GCATCGTCAA CACGCGCAAC
GGCTTGATCC AGAAGATCCC CAACATGCCG CCGAACTGGA CGGCGTCGCT CTCCGGCGGC
AAGTCGTTCG ACCTGGGCGG GGCGACGCTC GGCCTGATCG CTACGGCTGG CTACAGCAAC
AAGTGGACGT CGCGCGACGC GATCAACCAG ATCTCGACTT CGCCCGACGT GGGCGACCTG
TTCAGCGACT ACCGCCGCGT CACCACCGAC AACCGGGTGG TCGTGAACGG CATGCTCGGT
GTCGGTCTGG AATTCGGCAA GAACCGCATC CGCTGGACCA ACCTCTATAT CCGCGACACC
CTGAAGCACA CGCGCCTCGG GCTTGGCCGC AACGTCAACA GCAATGCCGA GGCAGACCAC
CAGGTGCAGG ACACTGCCTG GTACGAGCGG CAGCTCATCG ACACGCAGGT CGTCGCGGAA
CTGAAGCCGC TCGATGGGCT GAGCGTCGAC CTGCGCGGCG CCTATGCCAA TTCGCAGCGC
GAGGCGCCCT ACGAGCTTTC GTTCGATTAC GTGCGATCCA ACTCGTCGGC CGATCCCTAC
GGCGACTACT TCGTCAACCG GCTCAACAAC GGCAACGGCG GCGATGCGAC GGTCAGCTTC
TCGGACCTCA ACGAGAACCT GTGGTCGGGC GGCGTGGACG TGGGCTACAA GGTCATTCCG
ACGGTCAAGG TGACCGCGGG CTATGCCTAT GGCGACACCC GGCGCACCAG CTCGCGCCGC
GATTTCCAGT TCCAGGCGCC CAGCGACTTC CCTTCGGGCG TCGGCATGTT CCGTCCCGAC
TATCTCCTCA GCGACGCGGT CATCAAGGCC TACAACATCA AGCTGGTGGA GACCAACGAA
GGCGTGCCGG CCTTCCTTGC CACGCTGCGC AACCATGCCG GTTACGCCAA GATCGAAGCG
GAGCTGCTTT CCGGCCTGCA ACTCGACGCC GGCGTCCGTT ACGAGACGGC GAAGCTGCGC
GTGTCTCCGA TCCAGGTCTT CAACACGCCC GGCTCCAACG CCGCGCCGAC CAATCTCGAC
AACGACTACT GGTTGCCCGC CGCGACGCTC ACCTGGGAAG TGCGCGACAA CATGCAGGTG
CGCCTGAACG CCTCGAAGAC CATCGCCCGC CCGCAGTTCC GCGAGCTCGT CTACCAGTTC
TACTTCGATC CCGACACGAA CCGCACCTAT CGCGGCAACC CGAACCTCAA GGACAGCACG
CTGACCAACG CGGAGGCCCG CTTCGAGTGG TACTTCGCGC GCGACCAGCG CTTCTCGCTG
TCGGGCTTCT ACAAGCAGAT CAAGAACCCG ATCGAAAGCT TCGTCGCGGG CGAGGACTTC
ACCACCAGCT TCGCCAATGC GCCCAAGGCC GACCTTTATG GCGCGGAAGT GGAATTGCAG
AAGTACTTCG ACCTCGCCGA CTGGGGTGGC ATGTTCGCCA GCCGCCGCTT CACCTCGATC
GTGAACTACA CCTACACCAA GTCGAAGCTG CGGGTGAAGG AAGGCGACAC CACTTCTTAC
TACCTCGCCG CATCGAGCAA CGCGCTCGAG TACTTCCGCG ATGGCGCGTC GCTGACCGGT
CAGTCGGAGC ACATCGCCAA CGTCCAGTTC GGCCTCGAGG ATACCGACAA GCTCTCGCAG
CAGACGCTGC TGCTGTCCTA TGCCAGCAAG CGCGTCACCA GCCGCGGTCT CGTCAATACC
GGCCAGCCGG ACATCTACGA GGACCCCGGC CTGCGTATCG ACTTCGTCGC GCGGCAGGGC
TTCGACCTGT TCGGCAAGGA GCTTGAACTG AAGTTCGAGG CGCGCAACCT GACCGGGCGC
AAGCACATCG AGTATCAGCA GGTCGCGGGC AACCGGATCG ACGTCAACAC CTATGACGTG
GGCCGGACCT TCTCGCTGTC GGCATCGCTC AAGTTCTGA
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| Protein sequence | MITPRLATLL LLSTALSMPA LAQAQEATPS ATAETVAPQD DTGTAADAAP QEQAPEISVP
GGEIIVTGQR ERNVQRAAAQ VVSVLGTAEI ARTGEGNIAG ALGRVTGLSV VGNGYVYVRG
LGDRYSLALL NGSPLPSPEP LKRVVPLDLF PSSIIASSLV QKSYSVNYPG EFGGGVVNLT
TKAVPQDAFI QVGGGISADT ETTNQLGYTY YGSSTDWTGF DNGQRDYTSA LKSFLASGDR
ISGGTVDANA LAQGIVNTRN GLIQKIPNMP PNWTASLSGG KSFDLGGATL GLIATAGYSN
KWTSRDAINQ ISTSPDVGDL FSDYRRVTTD NRVVVNGMLG VGLEFGKNRI RWTNLYIRDT
LKHTRLGLGR NVNSNAEADH QVQDTAWYER QLIDTQVVAE LKPLDGLSVD LRGAYANSQR
EAPYELSFDY VRSNSSADPY GDYFVNRLNN GNGGDATVSF SDLNENLWSG GVDVGYKVIP
TVKVTAGYAY GDTRRTSSRR DFQFQAPSDF PSGVGMFRPD YLLSDAVIKA YNIKLVETNE
GVPAFLATLR NHAGYAKIEA ELLSGLQLDA GVRYETAKLR VSPIQVFNTP GSNAAPTNLD
NDYWLPAATL TWEVRDNMQV RLNASKTIAR PQFRELVYQF YFDPDTNRTY RGNPNLKDST
LTNAEARFEW YFARDQRFSL SGFYKQIKNP IESFVAGEDF TTSFANAPKA DLYGAEVELQ
KYFDLADWGG MFASRRFTSI VNYTYTKSKL RVKEGDTTSY YLAASSNALE YFRDGASLTG
QSEHIANVQF GLEDTDKLSQ QTLLLSYASK RVTSRGLVNT GQPDIYEDPG LRIDFVARQG
FDLFGKELEL KFEARNLTGR KHIEYQQVAG NRIDVNTYDV GRTFSLSASL KF
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