Gene Saro_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2417 
Symbol 
ID3916736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2591327 
End bp2593792 
Gene Length2466 bp 
Protein Length821 aa 
Translation table11 
GC content67% 
IMG OID640445172 
ProductBeta-N-acetylhexosaminidase 
Protein accessionYP_497687 
Protein GI87200430 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3525] N-acetyl-beta-hexosaminidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTTTGG ACTGGATTTT GCGGCGGCAT CATATAACAT ACTCCATACC AATTATGGAA 
TTGGACATGG CGCAGGCGGT GCGGTCCGGG GGTTTCGGCC CTTTCAGCGA TTCGGCGGGC
CGGTCCGGTG TCCTGCAGGG AGATCCCATG AAGCCGTCGA TGCTCAACCC GGCCCATCTT
GCAGCAGTCC CTTTCGCGAT CGCCGCGCTC GCGTCGGGCG CGGGCATTAC TTCGGCACAG
GCGTCGGCAC GATCAGGGAC CGACCTCCCG CTCATTCCGA TGCCCGCCAG CGTCGTCGCC
GGACAAGGCG CGCTGCGAAT CGGGGCGGAT ACGCCGGTCG TCGCGGCATC CGGTGACGCA
GGGGCCGAGC GCGCGGCGCG GTTCCTCGCC GAAAGGGCGA AGGCGCAGCG TGGGCTCTCG
CTGGCGACCG CAAGCATGGC TTCGGGCCCG GCCATACGGT TCGTCCGGGA CAACGCGATC
GCGGGCGAAG AGGCCTATCG GCTCACCGTC ACGGCCAAGG GCGCGACCGT CGCGGCATCC
GGCGACCGCG GCATGATCTG GGGGGCGGCA ACGCTGGTGC AGCTCCTGTC GCCCGACGGG
CGCACCGGCC AGCCGGTGCA GGTTCCGGCA ATGACCATAG AGGACGCGCC GCGCTATTCC
TGGCGCGGGC TGATGATGGA CGTGGCGCGG CACTTCCAGC CGATCGAGAC GCTCTATCCG
GTGGTCGACG CAATGGCCGA GCAGAAGCTC AACGTGCTCC ACCTCCACCT CAGCGACGAC
CAGGGCTGGC GGGTGGAGAT CAAGCGCTAT CCGAAACTGA CCGAGATCGG CGCCTGGCGC
ACGCCGCCAT CCGCCGGGGA GCCGACGGCC GCGAAAGTCG GCGGGTTCTA CACGCAGGAA
CAGCTCAAGG CGCTGGTCGC CTATGCCGGC GCGCGCGGGA TCACCGTTGT CCCCGAAATC
GACATGCCCG GCCACGCGCA AGCCGCGGTT GCCGCCTATC CGGAAGAAGT CGGCGTGCTG
GGCGACAGGC CGCAGGTGGG GCATGACTGG GGCGTCAATC CGTGGCTGTT CTCACCATCG
GAAGGCAGCA TGACCTTTAT CCGCAACGTG CTCGACGAAC TGGTCGAGGT GTTCCCCTCG
CCCTTCATCC ACGTCGGCGG CGACGAGGCG GTCAAGGACC AGTGGCAACG GTCGCCCGAA
GTGCAGGCGC AGATGGCCGC GCTCGGGCTC AAGACCGAGA ACCAGCTTCA GGGCTGGATG
ATCGCAGAAC TGGGCAAGCA TCTGGCCACC AAGGGCCGGC GCCTGATCGG CTGGGACGAA
ATCCTCGAGG GTGACGTGCC GACGAGCGCC TCGGTCATGT CGTGGCGCGG CGAAAAAGGT
GCGGTCGAAG CCGCGAACAA GGGGCACGAC GTGGTGCTGT CCCCCGCCCC CGACCTCTAT
CTCGACAACC TTCAATCAGA CCGCTCCGAC GAGCCCCCGG GTCGCATCGG CATCCGCACG
CTGGAGCAGG TCTACCGCTA TGAACCGACG CCTTCGGGCA TCGCGCCGGA GCGGCTGAAG
CATGTTCTGG GCGCGCAAGC CAATGCCTGG TCGGAGTACC TGGCGACGGC GAAGCAGAAG
GAACATGCAA TATTCCCGCG GCTTTCCGCC GTTGCCGAAG TGACATGGAC AGCGCCCGCA
CGTCGTGACT GGAAGAGCTT CGTCGCCCGG CTGGAGCCCC AGATGCTGCG CTACTCGCGC
GAGGGCATCG CGGCGGCCGA CAGCGCCTTT GCGGTAAACT TCCGCATGAA GGAAAGCCGG
GGCGAAGCGC TGCGTGGCGG CAGGCTGACG CTGGCGATGG ATACCCAGGC GGGCGCAGGC
ACGATCCGCT TCGGCGCGGG CCGCAAGATC TATCAGGGAC CGGTGACGAT CAAGGTCGGA
AGCAAGGTCG AAGCGGCGGC GTGGCTGGCC GATGGACGCA CGGCGGCAGC CCCGCGCACC
TTCGACGCCA CCCGTACGGC ATTGCTCACG GCAAGCGCTT CGGATCTTGC CGCCTGCCCC
AAGGGCGCGC TGGGCCTGAG GGTACCGCTC GTCTCCGGAC AGGTGGAGGA CGCGCCGGCC
TTCAACGTCA ACATCTTCGA CACCTGCACC CAGTGGATCG ATGCGCCGCT GGGTTCGGCC
AGGGGCGCGA CGTTCGAAGT GGCCCGACTG CCGCGCCACT ATGGCCTGGC GCACGAAGCA
TCGGCCCTGC GCGAGCATTA CGCGGTGACC GAACATGGCG AACTGGTCGT GCGGCGCGGC
GGTTGCGAGG GTGCGGTGCT TGCCACCTTC CCCCTGCCCG ATCCGAAAAG CGCGCCCAAC
CGGCTGCGCT TTGCCGCCCC GGTCGATGCC AAGCAGGGCG ACGGCGCGCT GTGCATGCAG
TTCACCTCTC CTCTGTACGA TCCGTTCTAT GCCATCGAAA AGGTGGTGCT GGAGGACTCG
CAGTGA
 
Protein sequence
MTLDWILRRH HITYSIPIME LDMAQAVRSG GFGPFSDSAG RSGVLQGDPM KPSMLNPAHL 
AAVPFAIAAL ASGAGITSAQ ASARSGTDLP LIPMPASVVA GQGALRIGAD TPVVAASGDA
GAERAARFLA ERAKAQRGLS LATASMASGP AIRFVRDNAI AGEEAYRLTV TAKGATVAAS
GDRGMIWGAA TLVQLLSPDG RTGQPVQVPA MTIEDAPRYS WRGLMMDVAR HFQPIETLYP
VVDAMAEQKL NVLHLHLSDD QGWRVEIKRY PKLTEIGAWR TPPSAGEPTA AKVGGFYTQE
QLKALVAYAG ARGITVVPEI DMPGHAQAAV AAYPEEVGVL GDRPQVGHDW GVNPWLFSPS
EGSMTFIRNV LDELVEVFPS PFIHVGGDEA VKDQWQRSPE VQAQMAALGL KTENQLQGWM
IAELGKHLAT KGRRLIGWDE ILEGDVPTSA SVMSWRGEKG AVEAANKGHD VVLSPAPDLY
LDNLQSDRSD EPPGRIGIRT LEQVYRYEPT PSGIAPERLK HVLGAQANAW SEYLATAKQK
EHAIFPRLSA VAEVTWTAPA RRDWKSFVAR LEPQMLRYSR EGIAAADSAF AVNFRMKESR
GEALRGGRLT LAMDTQAGAG TIRFGAGRKI YQGPVTIKVG SKVEAAAWLA DGRTAAAPRT
FDATRTALLT ASASDLAACP KGALGLRVPL VSGQVEDAPA FNVNIFDTCT QWIDAPLGSA
RGATFEVARL PRHYGLAHEA SALREHYAVT EHGELVVRRG GCEGAVLATF PLPDPKSAPN
RLRFAAPVDA KQGDGALCMQ FTSPLYDPFY AIEKVVLEDS Q