Gene Saro_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2416 
Symbol 
ID3916735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2590210 
End bp2590950 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID640445171 
ProductGntR family transcriptional regulator 
Protein accessionYP_497686 
Protein GI87200429 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.47741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCAT TTGTTGAACG GGTTGGTCTT CTCCGCCAGG ATGTCAGGAC GCCCCTGTAC 
CTGCAACTTC AGCAGCTCGT CCGCCAGGCG ATCGAGAACC GCGTTCTCAC GCAGGACGAC
ATGATTCCGG CCGAGCGCGA CCTTGCGGTC GAATACGGCG TCTCGCGCAT CACCGTGCGC
AAGGCGATTG ACGGGCTGGC GCAGGAGGGG CTGGTCGTGC GCCGTCGCGG TTCGGGCACG
TTCGTCGCCA CCCGCGTGGA AAAGAGCTTC TCCAAGCTGT CGTCCTTCTC GGAAGACATG
ATCGCCCGGG GCCGCAGGCC CAGCAGCGAA TGGCTTTCCA AGTCTCGCGG CCTTGTCACG
CCCGAGGAAT CGCTCTCGCT CGGCCTGTCG CCGGGGGCCG AGGTCTTCCG CTTCCAGCGC
CTCCGCTTTG CCGACGAGGT GCCGATGGCG ATCGAGTATT CGACCATCGC CGCCCATTGC
CTGCCGGGCA TCGATGCGGT CGGGGATTCG CTCTACGCCG CGCTCGAGGC TGTCGGCAAT
CGTCCTGTCC GCGCGCTGCA GCGCCTGCGC GCGATGCACT TTCCCGCCGA ACAGGCCAAG
CGTCTCGGCG TCGACGTCGA CCATGCCGGC CTGTTCATCG AACGTCGCGG TTTCCTCGCT
GATGGCGAGG CCGTGGAGTT TACCCAATCG TACTATCGCG GCGACGCTTA CGACCTCGTC
GCAGAGTTGA ACGCCAGCTA G
 
Protein sequence
MASFVERVGL LRQDVRTPLY LQLQQLVRQA IENRVLTQDD MIPAERDLAV EYGVSRITVR 
KAIDGLAQEG LVVRRRGSGT FVATRVEKSF SKLSSFSEDM IARGRRPSSE WLSKSRGLVT
PEESLSLGLS PGAEVFRFQR LRFADEVPMA IEYSTIAAHC LPGIDAVGDS LYAALEAVGN
RPVRALQRLR AMHFPAEQAK RLGVDVDHAG LFIERRGFLA DGEAVEFTQS YYRGDAYDLV
AELNAS