| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2410 |
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| Symbol | |
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| ID | 3916729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 2578324 |
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| End bp | 2581104 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640445165 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_497680 |
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| Protein GI | 87200423 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGAC CCAACACATC CATTCGGGAC CAAGGAGGGG GCCGGCCTTA CACCGGCGAA
ATCTTTGGCG CGCACTGCGC CAAGCTGTTG GGGGAAATAC GCATGACACT GCGGCATCTT
CTGTTGATCA CCACGACTGC CATGGTGGCC GCGCCCGTCG CCGCCCAGGC ACAATCCGTT
TCAAGCAACG AGGCTGACGG CATCGTCGTC ACCGGCATTC GCGCCTCGCT GCGCGACGCC
ATCGAGATCA AGCGCAAGGC CAGCTCGATC GTCGACGTGA TCAGCGCCGA AGATGTCGGC
AAGTTCCCCG ACGCTAACGT CGCTGACTCG CTCGCCCGTC TTCCCGGCGT CACCGTCGAC
CGCCAGTTCG GCGAAGGCGA ACAGCTTTCG ATCGCAGGCG TCGAACCCGC CCTCAACCGC
CTGACCATCG ACGGCCACTC GGTCGCCTCG GCCGACTGGG GCGGCAACCC CTCCGACCGT
TCGAGCCGCT CGTTCAACTA CTCGCTGCTG TCGCCCTCGA TCATCAGCCA GGCCGTGGTC
TACAAGACCC CCGAAGCCCG CCTCCAGGAA GGCGCTATCG GCGCGTCCGT CGACGTCGTC
ACGCGCAAGC CGCTCGACCT CGACTCCAAC ACCTTCCGCT TCAACGGCGG CTACGAATAC
AACGACCGCG CCGATCGCGG CAGCATCCGC GGCAACGCGC TCTATAGCTG GAAGAACGCC
GACGAAACCA TCGGCATCCT TGCCGCCGCC AACTACGACA AGGAACAACT GAGCCGCGCT
GGCGTGGCGG TCTACTGGTA CCGCACCGGC CAGGCCCTGC TGGACAACGC CCCGTCGACC
GCCACCGTCA ACGGCAAGGC GATCACCGAC CTGACCGAAG ACGAGCGCAG CGAATTCGCC
AGCTCGCGCT TCGCCTCGTT CCTCGCGCGC GAATTCTTCA AGCAGGAACG CGAACGCATC
GGCTTCAACG GCGCGATCCA GGTCCGTCCG TCCGACAACC TGAAGCTGAC CGGCACGGCC
CTGATCATTC GCGGCAACTA CGACAACGTC TCGAACTCGA TGTACACGTA TGGGTACGAA
GGTTCGCGCC TCATCTCGGC CCAGTTCAGC GGCGGTCTCG TGACCCAGGC GACCTTCTCG
GGCATCGCGG ACGGCCAGAC CGGCTCGACC GGCCAGCTCG ACACGCTCTA TCGCCGCACC
CGCGTGAAGA ACGACACCTA TTCGCTTGCC TACGAATGGG AACCCGACGG CTGGCACGTG
ACCGGCAACG TCGGCTACAC CCGCGCTTCG GGCGGCAAGG ACCCCGAATA CCTGCTCGAC
TTCCGCACCC AGCAGGGCTT CACTTCGGGT GCTAACGGCC GCAACACGAC CGTCGACTGG
GACAGCCCGG CGACCGACCC GACCAAGTGG CTGAGCAATT ACACCGCAAA CGGCGGCGAG
AACATCACCG CCTCCGACGG CCGCACCTTC TTCGGTCGCC AGATCGGCGG CATCCCGACC
AAGTCCGGCT TCACGCTGGA CAAGGAATGG TTCACCGAAG CCAATGCCGT GCATGACCTG
AACGCCGGGC CGTTCACCCA GCTGCTGTTC GGCGCGCGCT TCACTTCGCA CGAAAACAGC
AACACGACCT ACAGCAACGC GATCTTCACC GACCAGGACT TCACCCTGGC GGATCTTGAC
TACAACGTGC TGCCTTCGGG TCTCTATGAT GGCCTTGGCA CCTCGGGCAA CGGTGCACCC
TATGTCGGCA TGGACAAGGA CGGCATCATC GCCGCCCTGG CCAAGTACGG CAATTTCACC
GACGACCGCG GCCTGGCGAA GGGCGAATAC TGGCTGGTGA AGGAAAAGAT CGCGGCCGGC
TATGCCCAGG CGAACTTCGA AACCGGCAAG CTGCGCGGCA ACGTCGGCGT CCGCTTCGTC
AGCACCAAGA CGGAATCGAA CTTCTACGCG CAGAGCGGTT CGACCGTTCA GCTCGTGCAG
TACAACAAGA CCGACAACCG GTTCCTGCCC TCGATCAACG TGATCTACGA CGCGGGCGAT
ACGGTTGTGC TGCGTGCAGC GGCGGCCAAG GTCATGTCGC GTCCGCGCTA CTCCGACCTT
GCCGGCTACC TTTCGTTGAC CGACTCCACC TTGAGCGGCA GCGGCGGCAA CCCCGACCTG
AAGCCCTACC TTGCGACCAA CTTCGGGTTC TCGGCCGAAT GGTACTTCGC ACCGGGCAGC
TTCCTTTCGG GCGAAGTGTT CTACCGCGAC ATCTCGAACT ACGTGGGCAA CGAGACGCTC
GAGACCGAAC TGACCAACCC GATCACCGGC AACACCCTCA CCTATGCGGT GTCGCGCCCG
GTAAACGGCG GCAAGGCATC GGTCACCGGC TTCTCGATCT CGGGCAACAC CAACCTCGCC
TGGGGCTTCG GCATCCAGGC CTCCTACACC TTCGCCGATG CCGAGACGAG CAAGGCGGAA
GGCCTGCCCT TCCTGTCGCG CAACACGATC CAGATCTCGC CCTACTACGA GAACGGACCG
TTCCAGGCGC GCGTCAGCTA CAACCGTCGT TCGAAGTACT TCTACCGCTT CGGCCGCCAG
CAGTCGCAGG ACTACACCGA CGCCTACCGC CAGCTTGACG CGCAGGTCTC CTACGCGATC
AACGAGAACC TGAGCGTGAC GGCGACGGCT TCGAACCTGC TGGACGAGAC GTACTACCAG
TACAGCTCGA CCAAGAACGC GCCGACTTCG ATCTACAAGA ATGGCCGCGT CTATTCGGCC
AGCATGACTG CGAAGTTCTA A
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| Protein sequence | MIGPNTSIRD QGGGRPYTGE IFGAHCAKLL GEIRMTLRHL LLITTTAMVA APVAAQAQSV
SSNEADGIVV TGIRASLRDA IEIKRKASSI VDVISAEDVG KFPDANVADS LARLPGVTVD
RQFGEGEQLS IAGVEPALNR LTIDGHSVAS ADWGGNPSDR SSRSFNYSLL SPSIISQAVV
YKTPEARLQE GAIGASVDVV TRKPLDLDSN TFRFNGGYEY NDRADRGSIR GNALYSWKNA
DETIGILAAA NYDKEQLSRA GVAVYWYRTG QALLDNAPST ATVNGKAITD LTEDERSEFA
SSRFASFLAR EFFKQERERI GFNGAIQVRP SDNLKLTGTA LIIRGNYDNV SNSMYTYGYE
GSRLISAQFS GGLVTQATFS GIADGQTGST GQLDTLYRRT RVKNDTYSLA YEWEPDGWHV
TGNVGYTRAS GGKDPEYLLD FRTQQGFTSG ANGRNTTVDW DSPATDPTKW LSNYTANGGE
NITASDGRTF FGRQIGGIPT KSGFTLDKEW FTEANAVHDL NAGPFTQLLF GARFTSHENS
NTTYSNAIFT DQDFTLADLD YNVLPSGLYD GLGTSGNGAP YVGMDKDGII AALAKYGNFT
DDRGLAKGEY WLVKEKIAAG YAQANFETGK LRGNVGVRFV STKTESNFYA QSGSTVQLVQ
YNKTDNRFLP SINVIYDAGD TVVLRAAAAK VMSRPRYSDL AGYLSLTDST LSGSGGNPDL
KPYLATNFGF SAEWYFAPGS FLSGEVFYRD ISNYVGNETL ETELTNPITG NTLTYAVSRP
VNGGKASVTG FSISGNTNLA WGFGIQASYT FADAETSKAE GLPFLSRNTI QISPYYENGP
FQARVSYNRR SKYFYRFGRQ QSQDYTDAYR QLDAQVSYAI NENLSVTATA SNLLDETYYQ
YSSTKNAPTS IYKNGRVYSA SMTAKF
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