Gene Saro_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2402 
Symbol 
ID3916721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2569866 
End bp2571311 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content66% 
IMG OID640445157 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_497672 
Protein GI87200415 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCG TGCTCTCCTC TACCGGCAAG ATCAGCCAGG TCATCGGCGC CGTCGTCGAC 
GTGACCTTCG ACGGCGAACT GCCCGCGATT CTCTCGGCGC TCGAAACCGA CAACAACGGC
AACCGCCTCG TTCTCGAAGT CGCACAGCAC CTCGGCGAGA ACACCGTTCG CACCATCGCG
ATGGACTCGA CCGACGGCCT GACCCGCGGC CAGCCGGTGA CCAACACCGG CGCGCAGATC
TCGGTGCCGG TCGGCCCCAA GACCCTCGGC CGCATCATGA ACGTCATCGG CGAGCCGATC
GACGAGCGTG GCCCGGTCGG CGCGGAACAG ACCGCCCCGA TTCACGCCAA GGCTCCGGAA
TTCATCGAGC AGTCGACCGA AGCCGCGATC CTCGTGACCG GCATCAAGGT CATCGACCTT
CTCGCTCCCT ATGCGCGCGG CGGCAAGATC GGCCTGTTCG GCGGCGCCGG CGTGGGCAAG
ACCGTGCTCA TCCAGGAGCT GATCAACAAC ATCGCCAAGG GCCACGGCGG CGTGTCGGTC
TTCGCGGGCG TCGGCGAACG CACCCGTGAA GGCAACGACC TCTATCACGA GTTCCTCGAC
GCCGGCGTTA TCGCCAAGGA CGCCGACGGC AACCCGACCC CGGACGGCTC GAAGGTCGCC
CTCGTGTTCG GCCAGATGAA CGAACCGCCG GGCGCCCGTG CTCGCGTCGC GCTCTCGGGC
CTGACCATGG CAGAATACTT CCGCGACCAG GAAGGCCAGG ACGTTCTGTT CTTCGTCGAC
AACATCTTCC GCTTCACCCA GGCGGGTTCG GAAGTGTCGG CTCTGCTCGG CCGTATTCCT
TCGGCGGTGG GCTACCAGCC GACGCTGGCC ACCGACATGG GCCAGCTGCA GGAACGCATC
ACCTCGACCA CCAAGGGCTC GATCACCTCG GTGCAGGCGA TCTACGTCCC CGCGGACGAC
CTTACCGACC CGGCGCCGGC CACCTCGTTC GCCCACTTGG ACGCAACGAC CACGCTGAAC
CGCGCAATCT CGGAACTCGG CATCTACCCG GCGGTCGACC CGCTCGACTC GACCTCGCGC
GTTCTCACCC CCGCCGTCGT CGGACAGGAG CACTACGAGA CCGCCCGCCG CGTTCAGGAA
ACGCTGCAGA AGTACAAGTC GCTGCAGGAC ATCATCGCGA TCCTCGGCAT GGACGAGCTT
TCTGAAGAAG ATAAGCTCAC CGTCGCCCGC GCCCGCAAGA TCCAGCGCTT CCTGTCGCAG
CCGTTCCACG TCGCCGAAGT GTTCACCGGC ATCCCCGGCA AGTTCGTCCA GGTCGAAGAC
ACCGTCCGCT CGTTCAAGGC GGTTGTCGAC GGCGAGTACG ACCACCTTCC GGAAGCCGCG
TTCTACATGG TCGGCGGCAT CGACGAAGCG GTCGAGAAGG CCAAGAAGCT GGCTGCCGAA
GCCTGA
 
Protein sequence
MATVLSSTGK ISQVIGAVVD VTFDGELPAI LSALETDNNG NRLVLEVAQH LGENTVRTIA 
MDSTDGLTRG QPVTNTGAQI SVPVGPKTLG RIMNVIGEPI DERGPVGAEQ TAPIHAKAPE
FIEQSTEAAI LVTGIKVIDL LAPYARGGKI GLFGGAGVGK TVLIQELINN IAKGHGGVSV
FAGVGERTRE GNDLYHEFLD AGVIAKDADG NPTPDGSKVA LVFGQMNEPP GARARVALSG
LTMAEYFRDQ EGQDVLFFVD NIFRFTQAGS EVSALLGRIP SAVGYQPTLA TDMGQLQERI
TSTTKGSITS VQAIYVPADD LTDPAPATSF AHLDATTTLN RAISELGIYP AVDPLDSTSR
VLTPAVVGQE HYETARRVQE TLQKYKSLQD IIAILGMDEL SEEDKLTVAR ARKIQRFLSQ
PFHVAEVFTG IPGKFVQVED TVRSFKAVVD GEYDHLPEAA FYMVGGIDEA VEKAKKLAAE
A