| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2393 |
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| Symbol | |
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| ID | 3916712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 2558451 |
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| End bp | 2560652 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640445148 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_497663 |
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| Protein GI | 87200406 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATG CACCCGCGCT CTTCCTAGAC GGAAATTCGA CCCGCGTCCG CTGTTTAATT
TTCAACGCCG CCCTCGGCCC GCTCGATTAC CGGGTCCCCG CCGGGATGAC GGTCGAGCCC
GGCAGCGTGG TCATTGCGCC GCTCGGCCCG CGCCAGATCA TCGGCGTGGT CTGGGATGCC
GACCGGCTGC CCGCGACCGA GGTTCCGGAA GGCCGGTTGC GCCCCCTGCT CAAGGTCCTG
CCGGTTCCAC CCCTGCCCGC TCCCTTGCGC CGCCTGATCG AATGGACCGC GGACTATTAC
CTTGCCCCCC TCGCGGCGGT CGCGCGAATG GCCTTGTCGA GCAACGCGGC GCTCCAGGGC
GGCAGCACCG TCACCGAATA CCGCCTGACC GGCAAGGAGC CGGGCCGCCT CACGCCGCAG
CGCCTGATCG CGCTCGATCT CCTGCAGGAC CAGCAGGCGA CCATCCGCGA ACTGTCCGAA
ATCGCCGGCG TTTCCGACGC CGTTCTGCGC GGCATGGTCA ATGCCGGACT GCTCGAACCG
GTCGTCGTCG ATTCGGACCG CCCCTATCCT GCGGCCGATC CCCACTTCGC CGCGCCCGAC
CTCTCGGAGC AGCAGGCCGA AGTCGCCGCC AGGTTCGTGG CATCGGTGCG CGCGCGCGAA
TTTCACCCCT TCCTGCTCGA TGGCGTCACC GGGTCGGGCA AGACCGAGAC CTATTTCGAA
GGCGTCGCCG CCGCGCTCGA AGCCGGGCGA CAGGTTCTCG TGCTGCTTCC CGAGATCGCG
CTGACCGAAA CCTTCCTCAA ACGCTTCGAG GCCCGTTTCG GAGTGCCGCC CGTCACCTGG
CATTCCTCGC TGAAGTCGTC CGAGCGGCGC CGCGCGTGGC GCTCGGTGTC GTCAGGTGCC
GCACAGGTCG TCGTCGGCGC ACGCAGCGCC CTGTTCCTGC CGTTCGCCGA TCTTGGCCTC
ATCGTGGTCG ACGAAGCCCA CGAAATCTCG TTCAAGCAGG ACGACGGCGT GCGCTACAAC
GCCCGCGACG TGGCCGTCAT GCGCGCCCAC TTCGAGAAGA TCCCGGTCAT CCTCGCCAGC
GCCACCCCAG CTCTCGAAAG CCTCCAGATG GCCGAGGCGG GGCGCTACGA ACGGGTGGTC
CTGCCCGCCC GGTTCGGCGG CGCGACCATG CCCCACATCC AGGTCGTCGA CCTGCGCGTG
GAACAGCCCG AACGCGGCCA CTGGATCGCG CCGCCGCTGG TCAGGGCCCT GAAGGACCGT
CTCGAAAAGG GCGAGCAATC GCTGCTCTTC CTCAACCGCC GCGGCTATGC CCCGCTCACC
TTGTGCCGCA CCTGCGGCTA CCGCTTCCAG TGCCCGAACT GCTCGGCCTG GCTGGTCGAG
CACCGCCTCT CGCGCCGCCT TGCCTGCCAC CACTGCGGTC ACGAGGTCCC GCCGCCCGAC
GCCTGCCCCG AATGCCACGA ACCCGACTGC CTCGTCGCCT GCGGCCCAGG GGTAGAGCGC
ATTGCCGACG AAGTGGCCGA GATCCTGCCC CACGCCCGCG TCGCGCTGGT CACCTCGGAC
ACCCTGACCA GCCCCGCCAA GGCCGCCGAA TTCGTCGAGA TGGCCAGCAA CAAGGCCATC
GACGTGATCG TCGGCACGCA GCTCGTGACC AAGGGCTATC ACTTCCCCGA ACTCACCCTC
GTCGGCGTGA TCGATGCCGA CATGGGGCTC GAGGGCGGAG ACCTGCGCGC GGCGGAGCGC
ACCTACCAGC AGGTCGCCCA GGTCGCGGGC CGCGCCGGTC GCGGCGAAAA GCCGGGCGAA
GTCCTGATCC AGACCCGCCA CCCCGAAGCC CCCGTGATCG AGGCTCTCGC CAGCGGCGAC
CGCGACGCCT TCTACGAGGC CGAGGCAGAG GCCCGCCGCG ATGCCGGCGC GCCGCCCTTC
GGCCGCTGGG CCGCGATCAT CGTGTCGAGC GAGGACGAGG CGGAAGCGCG CGATGCGGCG
CGCGGCATCG GCGGCTCGGC CCCGCGCCTC GACGACGTCC TCATCCTCGG CCCCGCGCCC
GCCCCGCTCT CGCTCCTGCG GGGCCGCTAC CGCTACCGCC TGCTGATAAA CGCCCGCCGC
TCCACCGAAC TCCAGCGCGT GATCCGCGAA TGGCTCGATC CCCTGCGCTT CCCGCCGGGC
GTGCGCGTGG CGGTGGACAT AGATCCCTAC AGCTTCGTCT GA
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| Protein sequence | MSDAPALFLD GNSTRVRCLI FNAALGPLDY RVPAGMTVEP GSVVIAPLGP RQIIGVVWDA
DRLPATEVPE GRLRPLLKVL PVPPLPAPLR RLIEWTADYY LAPLAAVARM ALSSNAALQG
GSTVTEYRLT GKEPGRLTPQ RLIALDLLQD QQATIRELSE IAGVSDAVLR GMVNAGLLEP
VVVDSDRPYP AADPHFAAPD LSEQQAEVAA RFVASVRARE FHPFLLDGVT GSGKTETYFE
GVAAALEAGR QVLVLLPEIA LTETFLKRFE ARFGVPPVTW HSSLKSSERR RAWRSVSSGA
AQVVVGARSA LFLPFADLGL IVVDEAHEIS FKQDDGVRYN ARDVAVMRAH FEKIPVILAS
ATPALESLQM AEAGRYERVV LPARFGGATM PHIQVVDLRV EQPERGHWIA PPLVRALKDR
LEKGEQSLLF LNRRGYAPLT LCRTCGYRFQ CPNCSAWLVE HRLSRRLACH HCGHEVPPPD
ACPECHEPDC LVACGPGVER IADEVAEILP HARVALVTSD TLTSPAKAAE FVEMASNKAI
DVIVGTQLVT KGYHFPELTL VGVIDADMGL EGGDLRAAER TYQQVAQVAG RAGRGEKPGE
VLIQTRHPEA PVIEALASGD RDAFYEAEAE ARRDAGAPPF GRWAAIIVSS EDEAEARDAA
RGIGGSAPRL DDVLILGPAP APLSLLRGRY RYRLLINARR STELQRVIRE WLDPLRFPPG
VRVAVDIDPY SFV
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