Gene Saro_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2344 
Symbol 
ID3915689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2491066 
End bp2491854 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID640445100 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_497615 
Protein GI87200358 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAGG ATCGCGTTCT TCCGCTCGAG GGCATTCACA ACTTTCGTGA CTACGGCGGT 
TATGCCGCGC GGGGCGGTCG GCTGCGCAAG GGCGTGTTGT GGCGCTCCGG CCAGCATTCC
GAGGCGACGC CGGACGACCT GGCGAAGGTG CAGCGGATCG GCCTGGGCAC CGTCGTCGAC
CTTCGCGGCG ATAGCGAGCG TGAAGCCAAC CCCTGCCTGC GCCACGAGGA TTTCGCGGGT
GAGGTCCTGT TCCATCCGGG CGAGACTGCC AGCGTTCGCG GGCGGGCCGC TCACGAGGAA
ATGGCGCGCG AGGTGCGCTC TGCCGCCGAT GCGCACCAGG CCATGCTCCG CCTTTATGAG
ACCCTGCCGT TCCGTCCGGT CCTCGTCGGC ACGTTCCGCC TCTACATGCA GGCCCTGGCA
GGGCGTGATG CGCCCAGCCT TCTGCATTGC CTCGCCGGAA AGGACCGGAC CGGCGTTGCC
GCCGCGCTGG TTCACCATCT GCTCGGCGTG CATCCAGACG ACATGATGGC CGACTACCTG
CTCACCAACA CCGCCGGCAA CGCCGAGGCG CGGATCGAGG CCGGTGCGCG GCATGTCCGC
GAAGGGTTCG GCCGGTCGAT GGACGATGCT GCGGTGCGAG TGCTGATGGG CGTCGACGCG
GCCTTCCTCG ACCGCGCCTT TGCCGCGATG ATCGAAAGCC ACGGCAGCGT GGAGGACTAT
GCGCGCGATG TCCTCGGCGT CACCCCGCAG GCGCTCGAGG CGATGGAGCG GCGGTTGGTG
GAGGCCTGA
 
Protein sequence
MAQDRVLPLE GIHNFRDYGG YAARGGRLRK GVLWRSGQHS EATPDDLAKV QRIGLGTVVD 
LRGDSEREAN PCLRHEDFAG EVLFHPGETA SVRGRAAHEE MAREVRSAAD AHQAMLRLYE
TLPFRPVLVG TFRLYMQALA GRDAPSLLHC LAGKDRTGVA AALVHHLLGV HPDDMMADYL
LTNTAGNAEA RIEAGARHVR EGFGRSMDDA AVRVLMGVDA AFLDRAFAAM IESHGSVEDY
ARDVLGVTPQ ALEAMERRLV EA