Gene Saro_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2342 
Symbol 
ID3915687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2489181 
End bp2489969 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID640445098 
Productesterase/lipase/thioesterase family protein 
Protein accessionYP_497613 
Protein GI87200356 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID[TIGR03100] hydrolase, ortholog 1, exosortase system type 1 associated 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGGC GGCATCTGAC GTTCGCTTGC GAGGGCGCGA CGCTGGTCGG CACGCTCGAC 
ATCGACGGGG CGAGCCATGG CACGGGGCTG CTAATTGTTT CGGGGGGCAA CGAACTGCGG
GCAGGCGCAT GGTCTGGACA GGCACAGCTT GCAACCAGGC TGGCGCACGC CGGGTTCCCG
GTCTTTCGAT ACGACCGGCG TGGCGTGGGC GACAGCGAGG GCGAGAACCT GTCGTTTCGC
GGCGCCCTGC CCGACATCGC GGCGGCGCTG GCGGCCTTCC GCAGCGCCGC GCCGCACCTT
TCGCGGATCG TCGCGTTCGG AAATTGCGAT GCGGCGGCGG CGCTCATGCT GTTTGGCGCG
GAGCTTCAGG TCGACGGGCT GGTGCTGGCC AATCCCTGGA CGATCGACGG CGAGGAAGCA
CCGGATGCCA TGCCGGCCTC GGCCATTCGC AGCCGCTACC TGGGCAAGCT GGCCAGCCCG
CGAGAGATCT GGCGGCTGCT TTCGGGCGGC GTGAACCTCG GCAAGTTGGC CAGGGGCTTG
CGCACCGCCG CAGGGCATTC CCCTGCCCAC GCCGGACTGG CGCAGGACAT GAAGGCCGGA
CTCGACGCGT TCGCCGGTCC CGTGGCGATC CTGCTGGCGA GCCGGGATCG CACCGCGCAG
ATGTTCGAGG AGGCCTGGGG CGGCGAAGAC CCGCGCATCG CGCGGATCGA CAGCGCATCG
CACAGCTTCT CCGACGAGGC CGCGCGCGAA TGGCTCCACG CGCGGCTGGT CGAAGCGCTT
ACGCGATAA
 
Protein sequence
MTRRHLTFAC EGATLVGTLD IDGASHGTGL LIVSGGNELR AGAWSGQAQL ATRLAHAGFP 
VFRYDRRGVG DSEGENLSFR GALPDIAAAL AAFRSAAPHL SRIVAFGNCD AAAALMLFGA
ELQVDGLVLA NPWTIDGEEA PDAMPASAIR SRYLGKLASP REIWRLLSGG VNLGKLARGL
RTAAGHSPAH AGLAQDMKAG LDAFAGPVAI LLASRDRTAQ MFEEAWGGED PRIARIDSAS
HSFSDEAARE WLHARLVEAL TR