| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2318 |
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| Symbol | |
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| ID | 3915663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 2460343 |
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| End bp | 2463150 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640445074 |
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| Product | ribonuclease E |
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| Protein accession | YP_497589 |
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| Protein GI | 87200332 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGC GCATGCTAAT CGATGCGCGC CACCAGGAAG AAACCCGGGT GGCGGTGCTG
AAGGGCAATC GGATTGAAGA ATTCGACTTT GAATCTGCGG ACCACAAGCA GATCAAGGGC
AATATCTACC TCGCCAAGGT TACACGGGTA GAACCCTCTC TTCAGGCGGC GTTCGTCGAT
TTCGGCGGCA ACCGCCACGG GTTCCTCGCG TTCAGCGAAA TCCACCCCGA CTACTACCAG
ATCCCCAAGG AAGACCGCGA GGCTCTTCTG GCCGAGGAAG CCGCCCACGC CGAGGAAGAG
GCCGCCCTGC GCGCCGCCGA GGATGGTGAC GACGAAGACT ACGCCGATGG CGAAGGCTAC
GACTCCGATG AGGGCGTGAC CGAGGTCGAT ACGTCCGAGA AGGATCAGGT CGCTACAATC
GAAGGCGGCG TCGTCGAGAA CGGCTTCGAC CACGAAGGCG AGGAAGGCGA AGACGCCGAG
GCTTCGGAAG ACGGCGAAGG CGAGTCCGAG GACAACGGCC GCCGCCGTGG CCGCCAGCAG
GGCCGCCGCC GCCAGGGCCG TTCGCAGGGC AAGGAAGCAG ACGAACTGCG CGCCAAGCGC
ATGGCGCTGC GCCGCCGCTA CAAGATCCAG GACGTGATCC AGCGCCGCCA GGTGCTGCTC
GTCCAGGTCG TCAAGGAAGA GCGTGGCAAC AAGGGCGCGG CCCTCACCAC CTACCTCAGC
CTCGCGGGCC GCTACTGCGT GCTCATGCCG AACTCGAGCC ACGGCGGCGG CATCAGCCGC
AAGATCAACT CGGCCTCGGA CCGCAAGCGC CTCAAGACGA TCATTTCCGA ACTGGAACTG
CCGCGCTCGA TGTCGTGCAT CGTGCGCACC GCCGGCCTCC AGCGCACCAA GCCCGAGATC
AAGCGCGACT TCGACTATCT CGCCCGCCTG TGGGACGAGA TCCGCGAGCG CACGATGAAG
TCGGTCGCGC CCGCGCTGAT CCATTCGGAC AGCGACCTGA TCAAGCGCGC CATCCGCGAC
ATCTACAACC GCGATATCGA GGAAGTCGTC GTCGAGGGCG AGCATGGCTA CCGTGCCGCC
AAGGACTTCA TGAAGCTGCT GATGCCCAGC CACGCCAAGC GCGTGAAGGC CTATGCGGAC
CCCGTCCCGC TGTTCCAGCG CTATGGCGCC GAGGACCAGC TCACCGCGAT GTACGACCCC
GTCGTCCAGC TCAAGAGCGG CGGCTACCTC GTCATCAACC CGACCGAGGC GCTCGTCTCG
ATCGACATCA ACTCGGGCCG CTCCACCAAG GAACACGGCA TCGAGCAGAC TGCGGTCGCC
ACCAACCTCG AGGCCGCGCG CGAAATCGCC CGCCAGCTCC GCCTGCGCGA CATGGCCGGC
CTCGTCGTGA TCGACTTCAT CGACATGGAA TACGGATCGA ACATCCGTAA GGTCGAGAAG
GCGATGAAGG ACGCGCTCAA GAACGACCGC GCGCGCATCC AGGTCGGCCG CATCTCGGGC
TTCGGCCTGA TGGAGATGAG CCGCCAGCGC CTGCGCACCG GCGTTCTCGA GGCCACCACC
CGCGCCTGCC CGCACTGCGA CGGCTCGGGT CTTGTCCGCA CCGCCTCGTC GGCCGGCCTT
TCCGCGCTGC GCCTGATCGA GGACGAAGCT GCCAAGGGCA AGGGCAACGT CGTCACGCTC
TACGCCTCGC AGGAAGCGGC GGTCTACGTC CTCAACGCCA AGCGCGCGGA CCTGGCCGAG
ATCGAGGAAC GCTATGGCGT CACCGTCGAG GTCATTCCCG AGGGCGAGAA CGAAGGCGCG
AAGATGCGCG TCGCCTCGCG CGGGCCCAAG CCCGAATTCG TCCCACGCTT CGAACCCATC
GTCGAACCTG AAGAGGACGA CGTGGTCGAG GACGCCTACG AGGACGAGGA AGAAGTCGAG
GAACGCGCGC CGCGCGGCAA CCGCGCCGCA GAAGGTGACG AGGGCGAGCG GAGCGACGGT
CGTCGCAAGC GCCGCAAGCG CCGCCGTGGC CGCAACCGCG ACCGCCGCGA GGACGGCACC
GATGGCGAGG TCGAAACCTC GCTGGACGAT GCCGAAGCCG ATACCGATGC CGACGCCGAG
GGCGACGAAG CCGAAGGCAA CGAAGCTGCC ACTTCGGACG AAAACGCCGA CGAGAACGAT
CGCGGTCCGC GCAAGCGCCG CCGTCGTGGT CGTCGCAGGC GCGGTGGCCG TGAAAACGGC
GAGAACGGTG CCGACCAGTC GGGCCACGAT GAAGCCGAAG GCGACGATGC CGGCGCAGCG
GAAGCCGTAG CCGAAGCAGC CGAAGCCCCT GCGGCCGAGG AAGCGCCCGC CGCTGCCGAA
CCGGCAGTTG AGCCGGTCGT CGAGGAAGCC CCGGCCAAGC CCAAGCGCAC CCGCAAGAAG
AAGGTCGAGG CTGCTCCCGC CCCCGAAGCC GAAGCCGAAG CCGCACCGGC TGCCCCCGAA
GCTGCTGAAC CTGCCGCCGC TGAACCGGTC GCGGAAGAAG CCCCGGCCAA GCCCAAGCGC
ACCCGTAAGA AGAAGGTCGA GGCTGCTCCC GCCCCCGAAG CCGAAGCCGA AACCGAAGCC
GAAGCTGCCG AACCGGCTGC CGCTGCCGCA GAGGAAGCCC CGGCCAAGCC CAAGCGCGTC
CGCAAGAAGA AGGTCGAAGC CGTCGCCTCC GACGCCGCTC CGGCCGAAAC GGTGACCGCC
GAAGCGCCTG TCGCTGCACA GACCGCTGCC GAAGAGGCCG CCACCGAAGG CGAAGCCGGG
GATCAGACCC CGCGCCGTGG CTGGTGGCAG CGCACCTTCG GCGCCTGA
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| Protein sequence | MTTRMLIDAR HQEETRVAVL KGNRIEEFDF ESADHKQIKG NIYLAKVTRV EPSLQAAFVD
FGGNRHGFLA FSEIHPDYYQ IPKEDREALL AEEAAHAEEE AALRAAEDGD DEDYADGEGY
DSDEGVTEVD TSEKDQVATI EGGVVENGFD HEGEEGEDAE ASEDGEGESE DNGRRRGRQQ
GRRRQGRSQG KEADELRAKR MALRRRYKIQ DVIQRRQVLL VQVVKEERGN KGAALTTYLS
LAGRYCVLMP NSSHGGGISR KINSASDRKR LKTIISELEL PRSMSCIVRT AGLQRTKPEI
KRDFDYLARL WDEIRERTMK SVAPALIHSD SDLIKRAIRD IYNRDIEEVV VEGEHGYRAA
KDFMKLLMPS HAKRVKAYAD PVPLFQRYGA EDQLTAMYDP VVQLKSGGYL VINPTEALVS
IDINSGRSTK EHGIEQTAVA TNLEAAREIA RQLRLRDMAG LVVIDFIDME YGSNIRKVEK
AMKDALKNDR ARIQVGRISG FGLMEMSRQR LRTGVLEATT RACPHCDGSG LVRTASSAGL
SALRLIEDEA AKGKGNVVTL YASQEAAVYV LNAKRADLAE IEERYGVTVE VIPEGENEGA
KMRVASRGPK PEFVPRFEPI VEPEEDDVVE DAYEDEEEVE ERAPRGNRAA EGDEGERSDG
RRKRRKRRRG RNRDRREDGT DGEVETSLDD AEADTDADAE GDEAEGNEAA TSDENADEND
RGPRKRRRRG RRRRGGRENG ENGADQSGHD EAEGDDAGAA EAVAEAAEAP AAEEAPAAAE
PAVEPVVEEA PAKPKRTRKK KVEAAPAPEA EAEAAPAAPE AAEPAAAEPV AEEAPAKPKR
TRKKKVEAAP APEAEAETEA EAAEPAAAAA EEAPAKPKRV RKKKVEAVAS DAAPAETVTA
EAPVAAQTAA EEAATEGEAG DQTPRRGWWQ RTFGA
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