Gene Saro_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2301 
Symbol 
ID3915646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2441936 
End bp2442865 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content66% 
IMG OID640445057 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_497572 
Protein GI87200315 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTAC TCCACTCCGC TCCGCGCTGG TCCTCGAACG AGGGCGTGCT CGATACGCTG 
GTTGCTGCGC TTGGCGACAT GGTCGCCGCC TCTCGCGAGG AGCATGGCGA GATCCTGCTG
ACGGTGGTGC GTGACCGCGT CGAGGACGCT CTGCGCCTCC TTCGCGACGA TCACGAATAC
CAGCAGCTCA TGGACATCGC TGGCGTCGAC TATCCGCAGC GCGCGGAACG CTTCGACGTC
TGCTACTGTC TGCTTTCGGT GACGAAGAAC CATCGCGTGA TCGTGAAGGT TTCGACCGAC
GAAGCGACGC CGGTGCCCAC CGTTACCACG CTCTGGCCCA ATGCCGGCTG GTACGAGCGC
GAAGTCTACG ACATGTTCGG CGTCCTGTTC GCCGGCAATC CCGACTTGCG CCGCATCCTG
ACCGACTACG GCTTCCAGGG GCATCCGTTC CGCAAGGACT TCCCGCTGAC CGGCTATGTC
GAGCTGCGCT ATTCGGAAGA AGACAAGCGG GTGGTCTACG AGCCGGTGCA ACTGGCGCAG
GACCTTCGCC AGTTCGACTT CATGAGCCCC TGGGAAGGCG CGGACTACGT GCTGCCGGGC
GATGAAAAGG CCGTGCCGCC GCCGCCAGCC CCGGCTCCGG TCGCGACTGC GCCCGAGACC
AAGGGCGATG CCAAGGCCGA CGTTCCGAAG ACGACCGAAC AGCCCGCCGA TACCGGTGCT
GGCGAGAAGG CCAACGACGC TGCGGCAAAA CCGGTCGCGG AAGCTGCCGC TCCCGCTGCA
ACCAAGACCG ACGAGCCGGC TGCGCCCGAA CCGACCGAGG ATCGTCCGGC CCGCAAGCCG
CGCGCGAAGA AGGTTGCCGA CACCGAAGGT GCGACCGAAC CGGCTGCAAA GCCCAAGCGG
ACGCGAAAGA AGAAGGAGGA TGGCGAGTGA
 
Protein sequence
MTVLHSAPRW SSNEGVLDTL VAALGDMVAA SREEHGEILL TVVRDRVEDA LRLLRDDHEY 
QQLMDIAGVD YPQRAERFDV CYCLLSVTKN HRVIVKVSTD EATPVPTVTT LWPNAGWYER
EVYDMFGVLF AGNPDLRRIL TDYGFQGHPF RKDFPLTGYV ELRYSEEDKR VVYEPVQLAQ
DLRQFDFMSP WEGADYVLPG DEKAVPPPPA PAPVATAPET KGDAKADVPK TTEQPADTGA
GEKANDAAAK PVAEAAAPAA TKTDEPAAPE PTEDRPARKP RAKKVADTEG ATEPAAKPKR
TRKKKEDGE