Gene Saro_2293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2293 
Symbol 
ID3916611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2434564 
End bp2435607 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content61% 
IMG OID640445049 
Productrespiratory-chain NADH dehydrogenase, subunit 1 
Protein accessionYP_497564 
Protein GI87200307 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT TCTTCATGGG TCTTGGCCTC TCGTACGAGT GGGCCTGGGG CATATCGACC 
ATTGCCGGCA TCCTGCTGAT CGCGCTGCCG TTGATGCTCG GTGTTGCCAT GATCATCTAT
GCCGACCGCA AGATCTGGGC GGCGATGGCG CTGCGTCGCG GGCCGAACGT GGTGGGCCCG
CTGGGCCTGC TGCAGTCGTT CGCGGACGGC TTGAAGGTGT TCCTGCAGGA AACCATCATC
CCGACGGCTG CGAACAAGGG CCTGTTCCTG ATCGCGCCGA TCATCACCTT TACTGTCGCG
CTGATGGCCT GGGCGGTGAT CCCGTTCAAT TCGGGCGCGG TTCTGGCCAA CATCAACGTC
GGCCTGCTCT ACGTGCTCGC GATCTCGTCG CTCGGCGTTT ACGGCGTGGT GATCGCGGGT
TGGTCGTCCA ACTCGAAGTA TCCGTTCTTC TCGGCGATGC GCGCTTCGGC GCAGATGATT
TCCTATGAAG TCTCGATCGG CTTCATCCTG ATCTGCGTGG TCCTGTGGGC GGGGACGTTC
AACCTGAACG ACATCGTGAA GGCGCAGCAG AGCCACGTCT GGATCATCAA CGGCTTCGTC
GCGAACCCGC TACTGTTCCC GATGTGGGTG ATGTTCCTGA TCTCGGGCAT GGCCGAAACC
GCGCGCGCGC CGTTCGACCT GACCGAGGCG GAATCGGAAC TCGTCGCCGG TTACCAGACC
GAATACTCGT CGATGGCTTT CGCGCTCTAC TGGCTTGGCG AATATGCCAA CGTGCTGCTG
ATGTGTGCGC TGAACGCCGT GCTGTTCTGG GGTGGATACC TGCCGCCGCT CGACATTCCG
GTGCTCTATC TGGTGCCGGG CTTCGTGTGG CTGCTTCTCA AGATCCTGTT CTTCTTCTTC
ATCTTCAGTT GGGTGAAGGC GACGGTCCCG CGCTATCGCT ATGACCAGCT GATGCGCCTG
GGCTGGAAGG TCTTCCTGCC CGTATCGCTG CTGTTCGTGT TCCTCGTCAG CGGCTACCTC
ATGGCTACCG GACACTTCGC ATGA
 
Protein sequence
MTEFFMGLGL SYEWAWGIST IAGILLIALP LMLGVAMIIY ADRKIWAAMA LRRGPNVVGP 
LGLLQSFADG LKVFLQETII PTAANKGLFL IAPIITFTVA LMAWAVIPFN SGAVLANINV
GLLYVLAISS LGVYGVVIAG WSSNSKYPFF SAMRASAQMI SYEVSIGFIL ICVVLWAGTF
NLNDIVKAQQ SHVWIINGFV ANPLLFPMWV MFLISGMAET ARAPFDLTEA ESELVAGYQT
EYSSMAFALY WLGEYANVLL MCALNAVLFW GGYLPPLDIP VLYLVPGFVW LLLKILFFFF
IFSWVKATVP RYRYDQLMRL GWKVFLPVSL LFVFLVSGYL MATGHFA