| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2288 |
|---|
| Symbol | |
|---|
| ID | 3916606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2429506 |
|---|
| End bp | 2431056 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640445044 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_497559 |
|---|
| Protein GI | 87200302 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGTT TTCTTGGGAC CGGCTTCCCG ATCCTTTCGC TGATGCTGCT GGTGCCGCTC
GCAGCGGCGG TGGCGTGCCT TGTCGTCCCG CGCGAACAGG CGCGGACGGT AGCTCTCGTC
GCGACGCTGG TGGACCTCGT CCTTGGCGCG GTGCTGTGGG CGAACTACGA CGTCGGCGGC
GCGCAGTGGC AGTTTACCGA AAACGCCCCG CTCTTCGCAG GCTTTGCCTG GAAGCTGGGC
ATCGACGGCA TCGCGCTATT GCTGATCGCG CTCACGGTGT TCCTGATGCC GATCTGCATC
GGGGCAAGCT GGGTATCGAT CGACAAGCGC CAGGGCGAAT ACTACGCGGC GTTCCTCCTG
ATGGAGACGC TGATGATCGG CGTCTTCGCG GCGCAGGACT TGTTCCTGTT CTACATCATG
TTCGAGGCCG GGCTTATTCC GATGTACCTC ATCATCGGTG TCTGGGGTGG GGCGGATCGT
ATCTACGCCA GCTACAAGTT CTTCCTCTAC ACGCTGCTCG GCTCGGTCCT GATGCTGATC
GCGATGTTCT GGATGGTGAA CGAGGCCGGG ACGACCGACA TTCCGACGCT CATGGTCTAC
AACTTCCCGG TGAAGGCGCA GACCTGGCTG TGGCTCGCGT TCTTCGCCAG CTTCGCGGTG
AAGATGCCGA TGTGGCCGGT ACACACCTGG CTTCCCGACG CGCACGTGCA GGCACCGACC
GCCGGTTCGG TCATTCTTGC CGGCGTTCTG CTGAAGATGG GCGGCTATGG CTTCATCCGC
TTCTCGCTGC CGATGTTCCC CGAAGCCTCC GCGCAGTTCG CGCCGCTGGT GTTCGGGCTG
TCGATGGCGG CGGTTGTCAT CACTTCGCTG ATCGCGCTCG TGCAGCACGA CATGAAGAAG
CTGATCGCCT ATTCGTCGGT TGCGCACATG GCGATCGTCA CGGTCGGTCT CTTTGCCTTC
AACCGCCAGG GCCTCGAAGG CTCGATGATC GTGATGCTCA GCCACGGTCT GGTTTCGGGC
GCGCTGTTCC TCAGCGTCGG CGTGATCTAC GATCGGCTGC ATACCCGCGA AATCGATCGC
TACGGCGGCC TGTCGATCAA CATGCCCTAT TACGCGGTCT TCTTCCTGCT ATTCACCATG
GCGTCGATCG GCCTTCCGGG GACGAGCGGT TTCGTCGGCG AATTCCTGTC GCTGATCGGC
ATCTACCAGC TTTCGAGCTG GGTGGCGCTG GTCTGCACGA CCGGGATCAT CCTCGGCGCG
GCCTACATGC TCTACCTCTA CCGCCGGGTG GCTTATGGCG AGCAGAAGAA CGCCGATGCC
GCCGCCATGC CCGATCTCGA CAAGCGTGAG TGGGCGATGA TGGTGCCGCT GGCGGCCGTC
GTCCTGTGGA TGGGCGTCTA TCCCGAAAGC TTCATCGCGC CGATGCGCAA GGACATCGCG
TCGCTCGACG CCCGTCTCGC GCAGGCGAAG CCCAAGGGGG ACGCGCAGGT CGCAGTCGGG
AAGGCCAAGC CTGCAACCGA AGAAAATTCC GCGCATGAGG GGGCGCACTG A
|
|---|
| Protein sequence | MNGFLGTGFP ILSLMLLVPL AAAVACLVVP REQARTVALV ATLVDLVLGA VLWANYDVGG
AQWQFTENAP LFAGFAWKLG IDGIALLLIA LTVFLMPICI GASWVSIDKR QGEYYAAFLL
METLMIGVFA AQDLFLFYIM FEAGLIPMYL IIGVWGGADR IYASYKFFLY TLLGSVLMLI
AMFWMVNEAG TTDIPTLMVY NFPVKAQTWL WLAFFASFAV KMPMWPVHTW LPDAHVQAPT
AGSVILAGVL LKMGGYGFIR FSLPMFPEAS AQFAPLVFGL SMAAVVITSL IALVQHDMKK
LIAYSSVAHM AIVTVGLFAF NRQGLEGSMI VMLSHGLVSG ALFLSVGVIY DRLHTREIDR
YGGLSINMPY YAVFFLLFTM ASIGLPGTSG FVGEFLSLIG IYQLSSWVAL VCTTGIILGA
AYMLYLYRRV AYGEQKNADA AAMPDLDKRE WAMMVPLAAV VLWMGVYPES FIAPMRKDIA
SLDARLAQAK PKGDAQVAVG KAKPATEENS AHEGAH
|
|---|
| |