| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2282 |
|---|
| Symbol | |
|---|
| ID | 3916600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2423106 |
|---|
| End bp | 2424590 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640445038 |
|---|
| Product | Alg9-like mannosyltransferase |
|---|
| Protein accession | YP_497553 |
|---|
| Protein GI | 87200296 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.832199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACAAGG CTGGATCACG GCGGATCGAT CCGGCGCTCG TGTGGCTGAT GCTGCTGGCG
CTGGCGTTTC GCGTGCCCAT CGCCATCGCG ACCTTCTATC ATCACGCAGA CGAGGTGTGG
CAGTACGTCG AGCCGGCCTA TGGGCTGGTC ACGGGCGACT GGATACGCAC CTGGGACATA
CGCCTCGGCA TTCGTAGCTG GCTGATCCCG CTCATCCTGT TGGGGCCGGT CTGGCTAGGC
CACCTGATCG ATCCGCTGGG CGAGCTGCAC CTTGTGCTGC CACGGCTGTT CATGGTGCTC
GCCTCGCTGG GGACGGTCTG GGCGGGGTGG TCGCTCGGGG CGCGGTTCAG CCGTCGCCAC
GCGATTGCTG CCGCGTTCGT GGCGGCGGTC TGGGTGGATT TCGCCTATTT CGCACCGCGC
ACGTCAAGCG ACACGCTGTC GGTGCTGGCA ATCCTTCCCG GCCTGGCACT GCTCGTCCGG
TTTCGCGAAC GAGGCGATGT GCGCCTCGCG CTCGCGGGTG GCTTTCTTCT GGGACTGGGT
TTCATCACGC GGTTTCCGCT GGGGCCGGCC CTGGCTATCC CGTTCCTCTG GGCGGGGCGT
CTGGAGGTCA GGCGGGCGTG GCTGCCCATG CTCGCAGGGG CATTGCTGGC GGTTGCCTGC
GACGTGATCG CCAATGGCGC GATGGGACAG CTTCCACTGG TGTGGATCGT GCGCAACGTC
TTCGCGAACG TCGTGGAACA GCGCAGCCAC GCCTATGGCG TGGAAACGGC GGATTGGTAC
CTGCGGGTTT TCGTCTGGCA ATGGCAATAC ATCGCCATTC TGCTCGTCCC GGCCATCGCC
GCGGGCGCAC GTCGATATCC GATGCTGCTG CTGACGGCCC TGACGGTGAT CGCTGTTCAT
TCCGCGATCG GGCACAAGGA ATACCGGTTC ATCCTGCTTG GCGTCTCACT GCTTGTCCTG
CTGGGCGCGA TCGGGTCCGT GGATATTGCC GGGTGGATTG CCAGGCGAAG GGGCAGGGCC
CTGGCCGTCG GTGGTTTCGC CTTCGTCCTG AGCCTGTGGC TGGGAGCGTC CGTTCTTGTC
GCCGCGACAG AGCCGTTCAA GATCAACTGG GGCGTCGGTC AGGCACCCTT GCGCACCATG
CGCACCGTAC GCGCGCAGCC CGGTCTTTGC GGAATTGCCA CCTATCGCAT CCGCGACGTG
CCTTTCCTAT CGCGGGCCGT CCTGAATCGC GGTGTCGGGA CACTGCTGAT CGATGGTCCC
TCGGCACCCG AGGTGGCAAG GCGAGCCGAG GCGCGGTTCA ACGTGGCCGT CGCTCCTGCC
GAACACATGG GGGAGCTCCC GCCGAGCTTC CGCTTCGTCG GCTGCATGTC GCCCACGAAA
CCCCTGTTCG AACAGCAGTA TTGCGTCTTC GCGCGGCCGG GCCCCTGTAC CGAGTCCGCC
GGCGCGCTGG ATTACAACGC AGTGCTCAAG CGGATCGACC GCTAG
|
|---|
| Protein sequence | MDKAGSRRID PALVWLMLLA LAFRVPIAIA TFYHHADEVW QYVEPAYGLV TGDWIRTWDI
RLGIRSWLIP LILLGPVWLG HLIDPLGELH LVLPRLFMVL ASLGTVWAGW SLGARFSRRH
AIAAAFVAAV WVDFAYFAPR TSSDTLSVLA ILPGLALLVR FRERGDVRLA LAGGFLLGLG
FITRFPLGPA LAIPFLWAGR LEVRRAWLPM LAGALLAVAC DVIANGAMGQ LPLVWIVRNV
FANVVEQRSH AYGVETADWY LRVFVWQWQY IAILLVPAIA AGARRYPMLL LTALTVIAVH
SAIGHKEYRF ILLGVSLLVL LGAIGSVDIA GWIARRRGRA LAVGGFAFVL SLWLGASVLV
AATEPFKINW GVGQAPLRTM RTVRAQPGLC GIATYRIRDV PFLSRAVLNR GVGTLLIDGP
SAPEVARRAE ARFNVAVAPA EHMGELPPSF RFVGCMSPTK PLFEQQYCVF ARPGPCTESA
GALDYNAVLK RIDR
|
|---|
| |