| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2269 |
|---|
| Symbol | |
|---|
| ID | 3916585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 2409090 |
|---|
| End bp | 2410085 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640445023 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_497540 |
|---|
| Protein GI | 87200283 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.255645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGC CCCCGCTATT CGCAAACCTG CGCCTGCCCG TCATCGCATC GCCGCTGTTC
ATCATTTCCT GCCCGGAACT GGTCATCGCG CAGTGCAAGG CCGGCATCGT CGGCTCCTTC
CCTTCGCTCA ACGCCCGCCC GATCAGCCAG CTCGATGAAT GGCTGCACCA GATCACCGAG
GAACTGGCCG CCCACAACCG CGCAAATCCC GACCGGCCCG CTGCGCCTTT CGCGGTGAAC
CAGATCGTCC ACAAGACCAA CAACCGCCTC GACGAGGACA TGGCGCTGTG CGCCAAGTGG
CAGGTTCCCA TGCTCATCAC CTCGCTCGGC GCGCGCGAGG ACGTCTACAA TGCCGCGCAC
GGCTGGGGCG GCATCGTGCT GCATGACGTC ATCAACGACC GCTTCGCGCG CAAGGCGATC
GAAAAGGGCG CGGACGGCCT GATCCCGGTC GCGGCAGGGG CCGGCGGGCA CGCCGGCGCG
CAATCGCCCT TCGCCCTGAT GCAGGAAATC CGCGAGTGGT TCGACGGCCT CGTCGCCCTC
TCCGGCGCTA TCGCGCACGG GCAATCCATC CTTGCGGCAC AGGCACTTGG CGCCGACTTC
GCCTACATCG GCTCAGCCTG GATCGCCACC GAGGAGGCGA ACGCCAACGC GGCCTACAAG
CAGGCCATCG TCGACAGCCG CGCCGACGAC ATCGTCTATT CCAACCTCTT CACCGGGGTC
CACGGCAACT ACCTGCGCTC CTCGATCGTC AACGCCGGGC TCGATCCCGA AAACCTGCCG
GAAAGCGACC CGAGCAAGAT GAACTTCGGC TCGGGCGGCA ATACCGATGC GAAGGCGTGG
AAGGACATCT GGGGGTCGGG ACAAGGCATC GGCGCCGTGT CCGCGATCGA ACCGGTGGCG
ACGCGGGTGG ACCGGCTCGA GCGGCAGTAT CGCCAGGCCG CAGAGGCGCT TTCGGCAAAC
TCCGCACCCT TCCTGAAGGA GACCAGGTAC GTCTAG
|
|---|
| Protein sequence | MPLPPLFANL RLPVIASPLF IISCPELVIA QCKAGIVGSF PSLNARPISQ LDEWLHQITE
ELAAHNRANP DRPAAPFAVN QIVHKTNNRL DEDMALCAKW QVPMLITSLG AREDVYNAAH
GWGGIVLHDV INDRFARKAI EKGADGLIPV AAGAGGHAGA QSPFALMQEI REWFDGLVAL
SGAIAHGQSI LAAQALGADF AYIGSAWIAT EEANANAAYK QAIVDSRADD IVYSNLFTGV
HGNYLRSSIV NAGLDPENLP ESDPSKMNFG SGGNTDAKAW KDIWGSGQGI GAVSAIEPVA
TRVDRLERQY RQAAEALSAN SAPFLKETRY V
|
|---|
| |