Gene Saro_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2250 
SymbolqueA 
ID3916566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2390270 
End bp2391298 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content66% 
IMG OID640445004 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_497521 
Protein GI87200264 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0683578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTTG ATCTCTTCGA CTTCGAACTG CCGTCCGAAA ACATCGCCCT GCGTCCGGCA 
CGGCCTCGCG ATTCCGCGAG GTTGCTTGGC GTCGGCCGCG ATGGCCCGTT CCGCGATCTC
ATCGTGCGGG ACCTGCCGGA CCTGCTGAAC CCCGGCGATG TTCTGGTGTT CAACGACACC
CGCGTGATAC CCGCACAGCT CGAAGGACAG CGCGGCGAAG CGCGGGTCGG CGCGACTCTG
CACAAGCGCA TCGACCTGCG CCGCTGGCAG GCCTTCGTGC GCAATGCCAA GCGCCTGCGC
GAGGGCGACG TGATCCAGTT CGGGGCCGGT GTCACCGCAA CCGCTGAAAT GCGCCTGCCG
GACGGAAGCT GGACGCTGTT CTTCCCGGGC GAGGAACCGG TGGAGGTTCT CCTCGAACGC
GCTGGCCGCA TGCCGCTGCC GCCCTATATC GCGGGCAAGC GGCCGACCGA CGAGCAGGAC
CGCGAAGACT ATCAGACGAT GTTCGCGGCC AAGGACGGAG CGGTTGCCGC GCCAACCGCC
GCGCTCCACT TCACCCCGTC GCTGATGGAA GCGCTGGCGG CGCGCGGCGT GGCAACCGAG
ACGCTGACGC TGCACGTGGG TGCTGGCACG TTCCTCCCGG TCAAGGCCGA CGACACGCAG
GACCACCAGA TGCATGCCGA GTGGGGCACC ATCGACGCTG CCACCGCAGA TCGGCTCAAC
GCAGCCCGAG CCGCCGGCAA ACGCGTGATC GCGGTCGGCA CCACCAGCTT GCGCCTGCTC
GAAAGCGCTA CGGGAGAGGA CCGGGTAATC CGTCCGTTCG AGGGCGACAC TTCGATCTTC
ATTACCCCGG GATATACATT CCGCGCGATC GACGGGCTGA TGACCAACTT CCACCTGCCC
AAGTCGACCC TGTTCATGCT GGTCAGTGCG CTGATGGGTC TCGATCGCAT GCAGGCAGCC
TATGCCCACG CCATTGCCGG AGGCTACCGC TTCTACTCCT ACGGGGATTC GAGCCTGCTC
CTGCCATAA
 
Protein sequence
MRVDLFDFEL PSENIALRPA RPRDSARLLG VGRDGPFRDL IVRDLPDLLN PGDVLVFNDT 
RVIPAQLEGQ RGEARVGATL HKRIDLRRWQ AFVRNAKRLR EGDVIQFGAG VTATAEMRLP
DGSWTLFFPG EEPVEVLLER AGRMPLPPYI AGKRPTDEQD REDYQTMFAA KDGAVAAPTA
ALHFTPSLME ALAARGVATE TLTLHVGAGT FLPVKADDTQ DHQMHAEWGT IDAATADRLN
AARAAGKRVI AVGTTSLRLL ESATGEDRVI RPFEGDTSIF ITPGYTFRAI DGLMTNFHLP
KSTLFMLVSA LMGLDRMQAA YAHAIAGGYR FYSYGDSSLL LP