Gene Saro_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2234 
Symbol 
ID3916550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2375707 
End bp2377572 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content67% 
IMG OID640444988 
ProductDNA primase 
Protein accessionYP_497505 
Protein GI87200248 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTCA CCCCGCAATG GCTGGACGAA CTCCGCACCC GCATCTCGCT GTCGGGGCTG 
ATCGGGCGTT CGGTTCGCGT CCAGAAGGCG GGGCGGGAGT TCAAGGCCTG TTGCCCGTTC
CATAACGAGA AGACGCCCAG CTTCACGATC AACGACGAGA AAGGTTTCTA TCACTGCTTC
GGCTGCGGCG CGCATGGGGA TGCCATTCGC TGGATGACCG ATCACCAGGG CCTCCCGTTC
ATGGAGGCAG TGAAGGAACT GGCGCTGCAG GCAGGCATGG AAGTCCCTGC CCCCGATCCG
CGCGCGGCGA AACGGGCGGA GCAGCAGAAG TCGCTGCACG ACGTGATGCA GGCAGCGCAG
GATTTCTTCG TGCGCTGCCT TGGCGAGGAG CGCGGGACCG AGGCGCGGCG CTATCTGGCC
TCGCGCGGGT TTCCGGCTGG AATCGTTCGG GATTTCGGCT TCGGCTTCGC ACCGGACAGC
CGCACCGCCC TGAAGGAGGC GCTGTCCGGG TTTCCGGACG AAATGCTGAT CGAGGCAGGC
CTGCGCATCG TCGTGGAAGG CAAGGAGCCC TACGACCGGT TCCGGGGCCG CCTGATGCTG
CCGATCCTAG ATCCGCGCGG ACGGGTGATA GCGTTCGGCG GACGCATCCT GACGGCGGAA
AAGACCGACG CCCCCAAATA CCTCAATTCG CCCGACACGC CGCTCTTCGA CAAGGGGCGG
ACGGTCTATA ATCTCCACCG CGCCGGCCCC GCCTCGCGCC AGAACGGGCG CGTGGTGGTG
GTCGAAGGGT ACATGGACGT GGTCGCACTT GCGGCCGCGG GCATCGGTGA GGCGGTGGCG
CCGCTGGGCA CCGCGCTGAC CGAGCACCAG ATCGAGCGGC TGTGGCGGCT GGTGGAAACA
CCGACGCTTT GCTTCGACGG CGATGCCGCC GGGCAGCGCG CGGCGATGCG GGCGATTACC
CGCGCCCTTC CCCTGCTCCG CCCCGGCCAT TCGCTTCGCA TCGTGACTCT GCCGCAGGGA
ATGGACCCGG ACGACGTCGT TAAGAAGCAG GGTCCGGCGG CGATGGAAGC GCTGCTCGAC
GGGGCGCGCA GCCTCGTCGA CGTGCTGTGG GAAGTGGAGC GCGATGCCGC GCCGCTCGCG
ACTCCGGAGG ACAAGGCCGG GCTCAAGGCG CGGTTGCTCG CCCATTGCGA GACCATCCAG
CATCCCGACA TCAAATCGCT GTACCGTCGC GAGCTGACAG AGCGATTCGG CGAACTTGCC
TTTGCCCGCA AGGAGCGCGC GCCGTTCCAG CCCCGGCAGG GCGGATCGGC GGCCCGTGGC
AAGGGACAGC CGTGGAAGCC CGCGCCGCCG CCGCTTGCCG AGCAGGACAA GGCAAAGATG
CTGCGAATCG GGACCGGGCC AAGCACGAGC CTGCTGGCCG CGGTGCTGGA CGGACTGCTG
CGCCATCCGC AACAGATTGC CCGCCACGCC GATTCGCTTG CCAGGCTTCG ACCGGACGAT
CCGGCCACCT GCGCGCTGAT CGACGCCCTG CTGGTCCTCT CGGATGGCGT GCAACCGCTT
GAAAGCGAAG CGCTGCGCCC CATATTGCTG GAACGAGGGC TTCGGCTCCC GTCGGCGCAG
GACTACGCCG GAATGCGATT CGGCTTTCTG ACCGGTAGCG GTGATTCGGC AGCGGATGAA
CTTGCCGAAG CAGTCGCCAT CCTGGTCGAG TGGCCGGCGG TGGAAGAGGC GCTGGCAGAG
GCCACGAGAC GCGCCGAAAC CGAGCTTTCC GACGAAAACT TTGCCGAACA GCAAAGATTG
CGCGCGCGGA GTATGGCATT GCGTGCCCGT TTGGGGCAAA TGGGCCGTGC TCGTGCTGCG
TTATAA
 
Protein sequence
MTLTPQWLDE LRTRISLSGL IGRSVRVQKA GREFKACCPF HNEKTPSFTI NDEKGFYHCF 
GCGAHGDAIR WMTDHQGLPF MEAVKELALQ AGMEVPAPDP RAAKRAEQQK SLHDVMQAAQ
DFFVRCLGEE RGTEARRYLA SRGFPAGIVR DFGFGFAPDS RTALKEALSG FPDEMLIEAG
LRIVVEGKEP YDRFRGRLML PILDPRGRVI AFGGRILTAE KTDAPKYLNS PDTPLFDKGR
TVYNLHRAGP ASRQNGRVVV VEGYMDVVAL AAAGIGEAVA PLGTALTEHQ IERLWRLVET
PTLCFDGDAA GQRAAMRAIT RALPLLRPGH SLRIVTLPQG MDPDDVVKKQ GPAAMEALLD
GARSLVDVLW EVERDAAPLA TPEDKAGLKA RLLAHCETIQ HPDIKSLYRR ELTERFGELA
FARKERAPFQ PRQGGSAARG KGQPWKPAPP PLAEQDKAKM LRIGTGPSTS LLAAVLDGLL
RHPQQIARHA DSLARLRPDD PATCALIDAL LVLSDGVQPL ESEALRPILL ERGLRLPSAQ
DYAGMRFGFL TGSGDSAADE LAEAVAILVE WPAVEEALAE ATRRAETELS DENFAEQQRL
RARSMALRAR LGQMGRARAA L