Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2234 |
Symbol | |
ID | 3916550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2375707 |
End bp | 2377572 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640444988 |
Product | DNA primase |
Protein accession | YP_497505 |
Protein GI | 87200248 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTCA CCCCGCAATG GCTGGACGAA CTCCGCACCC GCATCTCGCT GTCGGGGCTG ATCGGGCGTT CGGTTCGCGT CCAGAAGGCG GGGCGGGAGT TCAAGGCCTG TTGCCCGTTC CATAACGAGA AGACGCCCAG CTTCACGATC AACGACGAGA AAGGTTTCTA TCACTGCTTC GGCTGCGGCG CGCATGGGGA TGCCATTCGC TGGATGACCG ATCACCAGGG CCTCCCGTTC ATGGAGGCAG TGAAGGAACT GGCGCTGCAG GCAGGCATGG AAGTCCCTGC CCCCGATCCG CGCGCGGCGA AACGGGCGGA GCAGCAGAAG TCGCTGCACG ACGTGATGCA GGCAGCGCAG GATTTCTTCG TGCGCTGCCT TGGCGAGGAG CGCGGGACCG AGGCGCGGCG CTATCTGGCC TCGCGCGGGT TTCCGGCTGG AATCGTTCGG GATTTCGGCT TCGGCTTCGC ACCGGACAGC CGCACCGCCC TGAAGGAGGC GCTGTCCGGG TTTCCGGACG AAATGCTGAT CGAGGCAGGC CTGCGCATCG TCGTGGAAGG CAAGGAGCCC TACGACCGGT TCCGGGGCCG CCTGATGCTG CCGATCCTAG ATCCGCGCGG ACGGGTGATA GCGTTCGGCG GACGCATCCT GACGGCGGAA AAGACCGACG CCCCCAAATA CCTCAATTCG CCCGACACGC CGCTCTTCGA CAAGGGGCGG ACGGTCTATA ATCTCCACCG CGCCGGCCCC GCCTCGCGCC AGAACGGGCG CGTGGTGGTG GTCGAAGGGT ACATGGACGT GGTCGCACTT GCGGCCGCGG GCATCGGTGA GGCGGTGGCG CCGCTGGGCA CCGCGCTGAC CGAGCACCAG ATCGAGCGGC TGTGGCGGCT GGTGGAAACA CCGACGCTTT GCTTCGACGG CGATGCCGCC GGGCAGCGCG CGGCGATGCG GGCGATTACC CGCGCCCTTC CCCTGCTCCG CCCCGGCCAT TCGCTTCGCA TCGTGACTCT GCCGCAGGGA ATGGACCCGG ACGACGTCGT TAAGAAGCAG GGTCCGGCGG CGATGGAAGC GCTGCTCGAC GGGGCGCGCA GCCTCGTCGA CGTGCTGTGG GAAGTGGAGC GCGATGCCGC GCCGCTCGCG ACTCCGGAGG ACAAGGCCGG GCTCAAGGCG CGGTTGCTCG CCCATTGCGA GACCATCCAG CATCCCGACA TCAAATCGCT GTACCGTCGC GAGCTGACAG AGCGATTCGG CGAACTTGCC TTTGCCCGCA AGGAGCGCGC GCCGTTCCAG CCCCGGCAGG GCGGATCGGC GGCCCGTGGC AAGGGACAGC CGTGGAAGCC CGCGCCGCCG CCGCTTGCCG AGCAGGACAA GGCAAAGATG CTGCGAATCG GGACCGGGCC AAGCACGAGC CTGCTGGCCG CGGTGCTGGA CGGACTGCTG CGCCATCCGC AACAGATTGC CCGCCACGCC GATTCGCTTG CCAGGCTTCG ACCGGACGAT CCGGCCACCT GCGCGCTGAT CGACGCCCTG CTGGTCCTCT CGGATGGCGT GCAACCGCTT GAAAGCGAAG CGCTGCGCCC CATATTGCTG GAACGAGGGC TTCGGCTCCC GTCGGCGCAG GACTACGCCG GAATGCGATT CGGCTTTCTG ACCGGTAGCG GTGATTCGGC AGCGGATGAA CTTGCCGAAG CAGTCGCCAT CCTGGTCGAG TGGCCGGCGG TGGAAGAGGC GCTGGCAGAG GCCACGAGAC GCGCCGAAAC CGAGCTTTCC GACGAAAACT TTGCCGAACA GCAAAGATTG CGCGCGCGGA GTATGGCATT GCGTGCCCGT TTGGGGCAAA TGGGCCGTGC TCGTGCTGCG TTATAA
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Protein sequence | MTLTPQWLDE LRTRISLSGL IGRSVRVQKA GREFKACCPF HNEKTPSFTI NDEKGFYHCF GCGAHGDAIR WMTDHQGLPF MEAVKELALQ AGMEVPAPDP RAAKRAEQQK SLHDVMQAAQ DFFVRCLGEE RGTEARRYLA SRGFPAGIVR DFGFGFAPDS RTALKEALSG FPDEMLIEAG LRIVVEGKEP YDRFRGRLML PILDPRGRVI AFGGRILTAE KTDAPKYLNS PDTPLFDKGR TVYNLHRAGP ASRQNGRVVV VEGYMDVVAL AAAGIGEAVA PLGTALTEHQ IERLWRLVET PTLCFDGDAA GQRAAMRAIT RALPLLRPGH SLRIVTLPQG MDPDDVVKKQ GPAAMEALLD GARSLVDVLW EVERDAAPLA TPEDKAGLKA RLLAHCETIQ HPDIKSLYRR ELTERFGELA FARKERAPFQ PRQGGSAARG KGQPWKPAPP PLAEQDKAKM LRIGTGPSTS LLAAVLDGLL RHPQQIARHA DSLARLRPDD PATCALIDAL LVLSDGVQPL ESEALRPILL ERGLRLPSAQ DYAGMRFGFL TGSGDSAADE LAEAVAILVE WPAVEEALAE ATRRAETELS DENFAEQQRL RARSMALRAR LGQMGRARAA L
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