Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2211 |
Symbol | |
ID | 3916527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2354601 |
End bp | 2355872 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640444966 |
Product | phage integrase |
Protein accession | YP_497483 |
Protein GI | 87200226 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.684899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAACA AAGTAGGTTT GACGGATGCA AAGATCGCAG GGCTGAAGGC GCCTGCTGCG GGTCAGATTG AGCTCGCCGA TGGCATCGTA CCCGGTCTTA GGCTCCGCAT GGGCGCCAGT GGTATCAAGA CGTACATTCT GCGCAAGCGG GTTCAGGGCA AATGGCTGAA TGTGACAATC GGACGTCATG GGCCAAGCTT TACACTGGCC CATGCTCGCA AGAAGGCGCG CGATCTGCTC GTGGATGTCG AGCAGGGCAA GAGCATCGCT AGAAAAGCGG GCGCAAAGAG GAAGGGATCA AAAGGCGTCG GGACAGTCGC GGAGCTCTAC GAGACGTACC TCGCTCAGCA GATCGAGGGC AAAAAGCGGA GCGCGAGGGA GTTCGATCGA GTGTTCCGAA AATACATCGA GCCCGAGATT GGAGACCGGC TCGCGGACTC CATAACCCGA AGTGACGTGA GCCGCTTCGT TGAGAAAATT GCGTTCGAGC GGGGCAAGGA AACCCTGACG ATGGCGCGGA TCGTGTATCG CCACCTTTCA ACTTTCTACA CTTGGGCCCT CACCAGATTG GAGCATATGC CCGCCAATCC TTGCCGGGAT GCATGGCGGC CGAAGCGGAA TGAGCCTCGC GACCGTGTAC TCAGCGACCG TGAGCTTGCT GCGCTGTGGC AATCTGCGGT CGAGGATGGC TATCCGTTCG GCCATCTCGT GCAGATGCTA ATCCTTACGG CTCAACGCAG AGGTGAAGTG CTTGATGCCG CGTGCGACGA GTTCGACTTC AAAGCCAAGG TCTGGACCGT CCCAGGTGAT CGAGCAAAAA ACGGCAAGGC CAATGTGGTG CCAATATCCG CTCAGGCTCT TGGAGTGATC ACCGAGATAT TCCGGGCTGC CGGGATTGAC CCCGATGACG CCCACAAACA ATCCCAGATC CTGTTGGCTT CGAAGGTCAC CAATACGAAC AGTGTCAGCG GACTATCCAA GGCCTGGAAG CGGATCAGAG CAAGCGTGGA CGAGAAGCTC GGCTACGAAG CCGGACACTT CACAATGCAT GATATTCGAC GGACGGTGGC GACCGGCCTC CAGCGTCTTG GCATACCGTT GGTGGTTTCT GAGGCGGTCC TGAATCACCA ATCAGGATCA GCTATGGCTG GCGTCGCTGG GGTCTATCAC CGTCACCAGT ATACCAACGA GAAACGGGAG GCGTTGGCGC TGTGGGGTAA GGAGGTAATG CAGATTGCAG CCAAGTACCC AGTCGAAGTC AAAGACGGCT GA
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Protein sequence | MANKVGLTDA KIAGLKAPAA GQIELADGIV PGLRLRMGAS GIKTYILRKR VQGKWLNVTI GRHGPSFTLA HARKKARDLL VDVEQGKSIA RKAGAKRKGS KGVGTVAELY ETYLAQQIEG KKRSAREFDR VFRKYIEPEI GDRLADSITR SDVSRFVEKI AFERGKETLT MARIVYRHLS TFYTWALTRL EHMPANPCRD AWRPKRNEPR DRVLSDRELA ALWQSAVEDG YPFGHLVQML ILTAQRRGEV LDAACDEFDF KAKVWTVPGD RAKNGKANVV PISAQALGVI TEIFRAAGID PDDAHKQSQI LLASKVTNTN SVSGLSKAWK RIRASVDEKL GYEAGHFTMH DIRRTVATGL QRLGIPLVVS EAVLNHQSGS AMAGVAGVYH RHQYTNEKRE ALALWGKEVM QIAAKYPVEV KDG
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