| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2196 |
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| Symbol | |
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| ID | 3918862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2334380 |
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| End bp | 2336281 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640444951 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_497468 |
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| Protein GI | 87200211 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.035125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCAG ATACCATTGA GAGGGCCGTC AGATCACTCC CGACCGTCAT CAGGTCGGGT
CGGAAGGTCA ATGGCCTCTA TCGCCTGCTG AAAAGCCCGC TCCTCTGGGA GCATGCCTAC
CAGCGGATCG CCCCGAATAA AGGGGCGATG ACGCCCGGAG TTGATGGTCA GACATTCGAC
GGCTTCTCGC CCGACAAGGT CAGGTCCATC ATCGAACGGC TTGCGAACGG GACCTATCGA
CCTCAACCGG CAAGACGGGT GTATATCCCG AAAGCCAATG GCCAGAAACG GCCACTTGGC
GTGCCGACCA CGGAAGACAA GTTGGTCCAG GAAGTGGTGC GGACGATCCT CGAGCAAATC
TATGAGCCGC TGTTTTCCAG ACACTCTCAT GGGTTCCGCC CGAAACGTTC ATGCCACACG
GCGTTGGAAT CGATCCGCGC CATCTGGACC GGGGTGAAAT GGCTGATCGA CGTCGATGTT
GTCGGGTTCT TCGACAACAT CGATCATGAT GTCCTCGTAT CCCTGCTCGA AAAACGGATT
GCGGATCGTC GCTTCGTGCG GCTCATCCGG GGTCTACTCA AGGCCGGGTA TGTCGAAGAC
TGGGTCTTTC ACAAGACCTA CAGCGGAACG CCCCAAGGCG GGGTCGTCTC CCCGATGCTG
GCGAACATCT ACCTGCATGA ACTGGATATG TTCATGCAGG CCAAGATGGC TGGCTTCGAC
AAAGGGAAGC AGCGATCACC ATCCCCTGAT GCCCGGCGCA TCAGGAACCG CCTGTCCTAT
GTCCGCCGCA CAGTGGATCA ACTTCGCGCC AAAGGGCGCG GCGACGATCC CAGAGTCACT
TCCTTCTTGG AAGAGATCGG TCGGCTCAAG GCGGAACGGC TTGCCGTTCC GGCCAGCGAC
GCCTTTGATC CGAACTACAG GAGACTGCGC TACTGCCGAT ACGCCGACGA CTTCATCATC
GGCGTCACTG GTAGCAAATC GGAAGCACGA CAAATCATGG AGGAGGTCAG GACCTACCTG
TCCGATCACC TGAAGTTGGC CGTGTCCGCC GAGAAAAGCG GAATCCACAA GGCTTCGGAT
GGGGCACGGT TCCTCGGATA CGAAGTCCGG ACCATGACCA ATCCCAATCC GCACAAGGCG
ATCTTCGATG GTCGTCCGGC AGTGCGGCGA GGCTTGGCCG ACCGGATGAA ACTTCTGGTG
CCAAGGGACC GCGTCGTGCG GTTCGTCAAC TCAAAGGAAT GGGGCGACTA CGACAGCTTC
AGACCTGTTG GGAGGGCGGC CTTGCGCTTC GCAAGCGATG TGGAAATCGT CCTAGCCTAT
AACGCCGAAT GGCGCGGCTT TGCGAACTAT TATGCCATTG CTGACGACGT GAAACGCAAG
CTGAACAAGG CAGGTTACTT CGCCTTGCTC TCATGCGTGA AAACCATCGC CGGAAAGCAC
AGGACATCGG CTCGCAGAGT CTTCGCCAAA CTGCGTCGCG GTACGGACTT CTATATCAGC
TACGAGGTGG GAGACACCAC CCGGACAATA AAACTGTGGC AGTTGAAGGA CCTCCAGCGA
CACACGCGCA CCTGGGGCGG GATCGATATC CCTTCCTCAG CAAAGTTCGT GTTCAGCAGG
ACAGAGCTGG TCGAGCGGCT CAACGCCCGC GAATGCGAGC GTTGCGGTAG CAATGACCAA
CCTTGTGAGG TTCATCACGT CCGCAGGATC GGCGAATTGC AGCATGCCGG GTTCAGTCGC
CATATGGCGG CCGCCCGTCA GCGTAAACGC ATGGTCTTGT GCTCCCGCTG CCACAACGAT
GTCCATGCCG GACAGCCGAC CGACCGCCAA CGGCGGACAG CACGCAGTCG TGGAGAGCCG
AATGCGCTGA AAGGTGCACG TTCGGTTCGG AGGGGGGCCT AG
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| Protein sequence | MLPDTIERAV RSLPTVIRSG RKVNGLYRLL KSPLLWEHAY QRIAPNKGAM TPGVDGQTFD
GFSPDKVRSI IERLANGTYR PQPARRVYIP KANGQKRPLG VPTTEDKLVQ EVVRTILEQI
YEPLFSRHSH GFRPKRSCHT ALESIRAIWT GVKWLIDVDV VGFFDNIDHD VLVSLLEKRI
ADRRFVRLIR GLLKAGYVED WVFHKTYSGT PQGGVVSPML ANIYLHELDM FMQAKMAGFD
KGKQRSPSPD ARRIRNRLSY VRRTVDQLRA KGRGDDPRVT SFLEEIGRLK AERLAVPASD
AFDPNYRRLR YCRYADDFII GVTGSKSEAR QIMEEVRTYL SDHLKLAVSA EKSGIHKASD
GARFLGYEVR TMTNPNPHKA IFDGRPAVRR GLADRMKLLV PRDRVVRFVN SKEWGDYDSF
RPVGRAALRF ASDVEIVLAY NAEWRGFANY YAIADDVKRK LNKAGYFALL SCVKTIAGKH
RTSARRVFAK LRRGTDFYIS YEVGDTTRTI KLWQLKDLQR HTRTWGGIDI PSSAKFVFSR
TELVERLNAR ECERCGSNDQ PCEVHHVRRI GELQHAGFSR HMAAARQRKR MVLCSRCHND
VHAGQPTDRQ RRTARSRGEP NALKGARSVR RGA
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