| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2183 |
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| Symbol | |
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| ID | 3918848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2324303 |
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| End bp | 2325931 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640444938 |
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| Product | TrwC protein |
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| Protein accession | YP_497456 |
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| Protein GI | 87200199 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.964158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCGG TAGCCAATGT CCGCACCGCC GGCGGGGCGG CCAACTACTT CGCTGCCGAC
AATTACTACA CGCGGGCTGA TGCCGATCGC TCGGGTGAAT GGCTGGGCAA CGGCGCTGCC
GCGCTCGGGC TCAAGGGGGC CGTCGACGCG CGGCAATTCG AGGCGGTCCT TAAGGGACTG
CTGCCCGATG GTAGCCGCGT CGGCAGTGAC AACCGGGCGC ACCGGGCGGG GACCGATCTC
ACCTTTTCGA TGCCGAAAAG CTGGTCGGTC CTTGCTCTGG TGGGCGGCGA CAAGAGGATC
CTCGATGCCT ACGCCGCGGC TGTCCGGGAA ACCCTGCGCT GGGCCGAGAA GAACCTTGCC
GAGACCCGGA TGGAGGTTCG GGGCAGAGAG CGTGCGGTCC AGACCGGCAA CCTTGCGATC
GCGCTCTTCC AGCACGACAC CAACCGCAAC CAGGAGCCCA ACGCCCACTT CCATGCCGTC
ATTGCCAATG TGACGAGAGG GGCCGATGGC AAATGGCGGG CGCTGCGCAA TGACAAGCTC
TGGCAGCACA ATACTTTGCT CAATGCCATG ACGATGGCGC GGTTTCGTCT GAGCGTCGAG
AAGCTCGGCT ACGAGGTCGG GGAGTTCGGC AAGCACGGCA ATTTCGAGGC CGTCGGTGTG
CCCAAAGACG TGCGCGATGC CTTCAGTTCG CGGCGGGCGG AGATTCTCGA CCGCCTGGCA
ACGATGGAAG GAAGGGGGCT CGCTGCTCGC AACGCAGCAA ACCTCATGAC CCGGGCAGAC
AAGGGGCGGA TCGAGGATCG CGATGCGCTG CGGCAGCAGT GGCGGGATAC GTCCACAAGG
CTGGGCTTTG ACCCCGCCAT GGTCATTGCC CGGTCCAATG CTCGCAGCGC GCAGGACCTT
GGCAATTTGA CTGGCGTTGG GTCCACGATG CGCGCGATAG TCCGCAATGC TCAGGCCCTT
GCAACCTCCT TGGCCGAGCG CCTCGGCCTG CGGGAAGGCG ACCCGCTGAT ACCGGCCCGG
CTGACCAATC GCAGTGTCGA GCAGGTCGCT GCAATTCATG CAGTCGCCTC GGCTGTGCGG
CATCTGGGCG AGCGGGAGGC GGCCTTCACC CGGGCCGAAA TCTACCGTGC AGCGCTTGGC
TTTGCGCTCC CAACCTCGCT CGCTGACATC GAGCAGCGCG TCGACCAGCT GCTCCGCCAG
GGACATCTGG AGAAGGGCAG GGGTGCCGAC CGGGAACTGC TGACGACACG CGATGCCATC
AGTCTCGAAC AGCGCATCAT CGCCGGGGTT GAAGACGGGC GCGGCACCGC GCCGGCGATT
GTTTCTCCCG ACATTGCCGG GTCCCGGCTG CAGGCCCTGT CCCAGATCAA ATACGGGCTC
ACCTTGAACG CTGGACAGGA AGGGGCAGGG CGCCTGCTGC TTGGCTCGAA CAACCGGATC
GTCGCGATCC AGGGCGTCGC GGGCGCAGGC AAGAGCACGG TCCTCAAACC TGTCGCCGAT
ATCCTGCGCG AGGAGGGCAG GAGTGTGCTC GGGCTGTCGA AGCCGCCGCA GCCTGGTTGT
CGCTTTCGAC AGCCGAGCGC GAGGCAACCG CGATTTATGC CTCAGGCCGA AACTTGCGCA
GCGCCGTGA
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| Protein sequence | MLSVANVRTA GGAANYFAAD NYYTRADADR SGEWLGNGAA ALGLKGAVDA RQFEAVLKGL
LPDGSRVGSD NRAHRAGTDL TFSMPKSWSV LALVGGDKRI LDAYAAAVRE TLRWAEKNLA
ETRMEVRGRE RAVQTGNLAI ALFQHDTNRN QEPNAHFHAV IANVTRGADG KWRALRNDKL
WQHNTLLNAM TMARFRLSVE KLGYEVGEFG KHGNFEAVGV PKDVRDAFSS RRAEILDRLA
TMEGRGLAAR NAANLMTRAD KGRIEDRDAL RQQWRDTSTR LGFDPAMVIA RSNARSAQDL
GNLTGVGSTM RAIVRNAQAL ATSLAERLGL REGDPLIPAR LTNRSVEQVA AIHAVASAVR
HLGEREAAFT RAEIYRAALG FALPTSLADI EQRVDQLLRQ GHLEKGRGAD RELLTTRDAI
SLEQRIIAGV EDGRGTAPAI VSPDIAGSRL QALSQIKYGL TLNAGQEGAG RLLLGSNNRI
VAIQGVAGAG KSTVLKPVAD ILREEGRSVL GLSKPPQPGC RFRQPSARQP RFMPQAETCA
AP
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