Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2178 |
Symbol | |
ID | 3918843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2321554 |
End bp | 2322195 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640444933 |
Product | putative phage repressor |
Protein accession | YP_497451 |
Protein GI | 87200194 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0386181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGACG CACGCAGAGC CCTGGACGAA CTGATCCAGC AACGAGGGGT GAATTACTCC TCGGTTTCGC GCCTGCTGGG GCGCAATGCC GCTTACATCC AGCAGTATAT TCGGCGCGGC AGTCCGCGGC AGTTGGACGA GCAGGATCGC TCGGTCCTGG CGCGATTTTT CGGAGTCGAT GAGAAGGTCC TTGGAGCCCC TGCCCGCCGC TCAGGCCCGG TGGTAGAGTT GGTCCATGTA CCTTTGCTCA ATGTCGAGGC ATCAGCCGGC CATGGCGCTC TGGCCGAAAT GGAAGCCAAA TCCGCGCAGT TCGGCTTCGA CGAGAAGTGG CTGCGCCGAC TGACCGCGAG CAAGGCGTCG AGCCTGTCGA TTATCGCGGT CCATGGGGAC TCGATGGAGC CCACCCTCCA CGATGGCGAC GAGGTGATGG TCGATCTCGG GGATGGCCAG TCGCGGCTGA GAGACGGGAT CTATGTCCTG CGGATGGATG ACATGCTGAG CGTCAAGCGG ATTGCCCTCG AACCACAGGG CAAACGCGCG TCGGTCCTGA GCGACAACCC TGCCTATCCA AGCTGGCGCG GCCTCGAGAA ACGCACGCTT AACATCGTCG GACGGGTTCT CTGGTTCGGA CGGGCGCTCT AA
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Protein sequence | MDDARRALDE LIQQRGVNYS SVSRLLGRNA AYIQQYIRRG SPRQLDEQDR SVLARFFGVD EKVLGAPARR SGPVVELVHV PLLNVEASAG HGALAEMEAK SAQFGFDEKW LRRLTASKAS SLSIIAVHGD SMEPTLHDGD EVMVDLGDGQ SRLRDGIYVL RMDDMLSVKR IALEPQGKRA SVLSDNPAYP SWRGLEKRTL NIVGRVLWFG RAL
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