| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2172 |
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| Symbol | |
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| ID | 3918837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2310734 |
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| End bp | 2313502 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640444927 |
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| Product | helicase-like |
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| Protein accession | YP_497445 |
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| Protein GI | 87200188 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.338314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGACC TGATCTCCCG CTTTTCCTCG CGCAATCACC GCCTCTCCCA TGTCTTCTTG
AAGGACCGGC TGAAAGGGGC AGAGACCTAT GACCGGATCG CCGGGTATTT CCGCTCCTCC
ATTTTCGACC TGATCCACGA GGAGATCAGC ACAATCGGTC GGGTCCGGAT CGTCTGCAAC
GCGGACCTAG ACCCGCGTGA CCTGACGGCG GCCACGCTCA GTCAAAAGGC TCGCGACCAG
GCGCAGGTCG AGCGGTGGCA CGAGCAAGGG GACGAGGTCG ACGCACTCTT GGAGCGGCCC
CGCTGGCGGC GCTTGCACGA GCTGTTGACC GCCGGGAATG TAGAGATCCG GGTCGTCTCA
CGCGATAACG CGCCCTTCCT GCATGGAAAG GCGGGGGTAA TAACCCGCCC CGACGGGACT
ACCTCTAGCT TCATTGGGTC CATCAATGAG ACCGCAAATG GGTGGGTGCA ATCCTACGAA
ATGATCTGGG AGGACCAGTC CCCAGAGGCG GCCACTTGGG TCCGGTCCGA ATTCGACTGG
CTCTGGAAAA AGGGGGTGCC CCTTTCACAG GCTGTGATCG ACGAGATTGG TCGGACAGCC
AACAAGATAG AAGTTCAGGT GGAGGAGATG CAGTCCGACC CGGTCGGACT GGCTAAATCC
GTCACCGTCG AGAGCCCCCT CGTGCGCCGT GGAGAGGGAC TCGCCCCATG GCAGAAGGCT
TTCGTGAAGA TCTTCGTAGA GCATGACCAG AAATACGGGG CAGCTCGTCT CCTGCTCGCC
GATGAAGTAG GGGTCGGAAA AACCCTATCA ATGGCCGCAA CTGGCGCGCT CTCGGTCCTG
ATGGGGCACG GGGCCTTCCT CATCCTCTGC CCGGCCACCC TGACCCTCCA ATGGCAGATG
GAGCTCTGGG ACAAGCTGGG TCTCCCTTCC TGTGTCTGGG CGCGCGCGCC TCAGAAGGGT
TGGTTGGACC ATCGTGGCCA CCTCTACCGG TCACGGGATC CAGATGACGT GCTGCGCTGC
CCAGCGCAAA TCGGGATTGT CTCAACCGGC CTCCTTGTAC GCGGCGGCCC GGAGGCACAG
GCACTGTTGC GCGGGACCTA CGGAATGATA GCGCTCGACG AGGGGCACAA GGCTCGGGTC
AAACGTGGGA TCGGGATGGA TGAGCCGGAG CCAGGTAAGC TCTACCAGGC CATGGAGCGC
CTTGCCGGGC GAACACGCCA CCTAGTAATC GGGACTGCAA CCCCGATCCA GACGCACCGG
GAGGAGATCT GGGACCTTAT GAAGCTACTC GCCTACGGGC AGGATCATGT CCTTGGGCGG
CCGAGCGCGT CTCGGTGGTG GGACTCAGAG CAGGCACTCG ACCTAGTTTC TGGTCGGACG
GCCCCGCCGG AACCAGAAGC GGCCTGGCCT TGGCTCCGCT CACCACTCCC GCATGCCCGC
GAGGCAGCCG TGTTCCGGGC GATACGAGAG GACCTGAAGG TCCGGGAAGA CGAGTTTTTC
ACTGACCGCG GCCTCGCGGA TCTGGACGAT TTCACCCGCG AGGACCTGGC GGAGGTGCTC
GAAATGGGAG AGATCGCCCG TAAACTGCCG TTCATGCGGT ACCACAACCC GCTTGGCCGC
CATGTAGTCC TGCGCCGCCG TAAGACGCTT GAGGAAGCAG GACTGATGGA CCGGATCGCG
GTCAACATCC ACCCGCGCCC TAGCACCTCC CCGGCGGTGT TCGAGCGTGG TGCGGTCCGC
ACACCGCATT TCTATGACCG AGCTTACGAG GAGGTCCAAC TCTTCACAAA GGCAATGAAG
GCGCGTCAGG CTGGAACTGG GTTTCTCGGA AATCTGATGA TGCAGCGCAT ATGCTCCTCC
ATCGCGTCCG GAATAGCGAC CGCTACCAAG ATGCTGGAGC GCCGCCGCGA GGGAATTCTA
GCCGAAGAGG CTGAAGATCC TGACCTGCTG GAAGCGATCG AAGAATTGGG AGCGGAGGCT
TATGCTGCCG CTGTGGATGT CGAGGCGATC CATCTCGAAC GGGTTTTGGA GATTCTGTCT
TCGGCTAAGC AGGAAGATCC AAAGGGACGT GCTGTCCTGC ACTATCTTGA CCAAGAGGGG
TGGCTTGCGC TCGGCTGCAT CATCTTTTCC CAGTATTATG ACACTGCTCG CTGGGTAGGT
GAGTTAATCA GCGAGACGCA CCCCACAGAG CCGGTCGCGG TATATGCCGG GGTTGGAAAG
TCAGGTGTCT TGCTTGGCGG GGAGTGGCGG TCGATCGACC GCGAGGACAT CAAACGGGGG
GTCAAGGAGC GGAAGCTTCG GGTCGTCTGT GCGACTGACG CCGCCTGTGA GGGTTTGAAC
CTCCAGACTT TGGGCACCCT AATCAATGTC GATTTGCCGT GGAATCCGTC TCGTCTGGAA
CAGCGGATCG GTCGAATCAA ACGGTACGGC CAGCAGCGTC GCGAGGTGGA TATGGCGAAC
CTGGTGTATT CAGGCACTAT CGATGAACGG GTTTACCAAC GTCTCTCGGA GCGCATGCAG
GACCGCTACG ACATACTTGG CTCGCTGCCC GATACCATCG AAGACGATTG GATCGAGAAT
ATTGAGCGAC TTGAGGCGGA GCTCAAATCT TTCACCAAGC CGGAAAGTCC GGCTGATGTT
TTCAGCTTGA GGTATGGAGA TTTTCTCGAA GTTGGCGATG GCGACGCTGA CTGGGAGCTT
TGGACTAAAG TAGTTTCACG CAGAGATATC GAGACTTTGC TTGAGCGTCC CTGGGGCTCT
GGCAGGTGA
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| Protein sequence | MPDLISRFSS RNHRLSHVFL KDRLKGAETY DRIAGYFRSS IFDLIHEEIS TIGRVRIVCN
ADLDPRDLTA ATLSQKARDQ AQVERWHEQG DEVDALLERP RWRRLHELLT AGNVEIRVVS
RDNAPFLHGK AGVITRPDGT TSSFIGSINE TANGWVQSYE MIWEDQSPEA ATWVRSEFDW
LWKKGVPLSQ AVIDEIGRTA NKIEVQVEEM QSDPVGLAKS VTVESPLVRR GEGLAPWQKA
FVKIFVEHDQ KYGAARLLLA DEVGVGKTLS MAATGALSVL MGHGAFLILC PATLTLQWQM
ELWDKLGLPS CVWARAPQKG WLDHRGHLYR SRDPDDVLRC PAQIGIVSTG LLVRGGPEAQ
ALLRGTYGMI ALDEGHKARV KRGIGMDEPE PGKLYQAMER LAGRTRHLVI GTATPIQTHR
EEIWDLMKLL AYGQDHVLGR PSASRWWDSE QALDLVSGRT APPEPEAAWP WLRSPLPHAR
EAAVFRAIRE DLKVREDEFF TDRGLADLDD FTREDLAEVL EMGEIARKLP FMRYHNPLGR
HVVLRRRKTL EEAGLMDRIA VNIHPRPSTS PAVFERGAVR TPHFYDRAYE EVQLFTKAMK
ARQAGTGFLG NLMMQRICSS IASGIATATK MLERRREGIL AEEAEDPDLL EAIEELGAEA
YAAAVDVEAI HLERVLEILS SAKQEDPKGR AVLHYLDQEG WLALGCIIFS QYYDTARWVG
ELISETHPTE PVAVYAGVGK SGVLLGGEWR SIDREDIKRG VKERKLRVVC ATDAACEGLN
LQTLGTLINV DLPWNPSRLE QRIGRIKRYG QQRREVDMAN LVYSGTIDER VYQRLSERMQ
DRYDILGSLP DTIEDDWIEN IERLEAELKS FTKPESPADV FSLRYGDFLE VGDGDADWEL
WTKVVSRRDI ETLLERPWGS GR
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