| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2167 |
|---|
| Symbol | |
|---|
| ID | 3918832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 2304768 |
|---|
| End bp | 2305883 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640444922 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_497440 |
|---|
| Protein GI | 87200183 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02740] TraF-like protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA AAAAACGCCT TCTGTCATGG CTTTGCGGAG CACTTCTGCT CACCAGCCTG
AGCGTCGTAT CCAGTGCTCC TGCCCAGGCT GCGGCCGGCC CCGGGCGCTG CACTGGCAAG
TTCGTCAATC CGATCACGGA CATCTGCTGG TCGTGCCTGT TTCCGATCTC GATCGGTGGC
CTGAAGATCT GGCCGTCAAG CCGTCCCGAT CCGAGCAACC CGGCTCTCCC TGTTTGCCTC
TGCGGTTTGC GGCCCGGCAT CGCCATGGGG TTCTGGGAGC CGGTCCGGCT TGCCGACGTC
AGCATGAAGC CATGGTGCTT TGTCAATCTC GGCGGGATGA AGCTCGATCC GGGGTTCGAC
ATCGGCTTCA AGTCGATGGC GGGGCCATCG GCGGTTGGCG GCGCCACGCA GTACAACTCG
CAGTGGCATG TCCACTGGTA TGCCTACTGG TTCTACTGCG AGCGGCCCAA GACGCCGGAG
CAGAATTCGC CCTCGCCAGC ACCTGCGGCC AGCGCGACCA GTCAACTTGA TGCGATCACG
GCGACGTTGC GCGAACTGAA GGCCAAGGCG ATCCTCGAGC CGACGCCGGC AAATGTGACG
GCCTATATCC GGTTCCAGCG CGCGCAGCTC GACCGGGCAT CGCTCTTCAG CGACGTCTGG
CAGCGGGCGA TCTGGCAGGA TCCCGAGCTC GACTACACGC TGCAGCGCCC GGTCTCGACA
CTTGGCAAGC GCCAGTGGCA GGATTCGCGA AGCGCGGAAC GGAACGCCGC GATGGCCCAG
CTTTCCGAGC GCTACGGGCT GTTCTACTTC TTCGCCCAGA GCTGCGGCGC TTGCGAAGTC
ATGTCGCCAA TCGTGCAGAG CGTTGCCTCG ACCTGGCATA TCGCCGTGCG CGCGATTTCG
ACCGATGGCG GCCCGTCGCG GCATTTCCCG AACTACACGG TCGAGACCAA CCAGCGCAGC
CGCATGGGGC TCGAGCCCAA GATCACGCCA GCGGTCGTGC TCTGGGACGC GCAGACCGGC
CGCCCCATTC CGATCGGCTA CGGCGTCATG AGCGCCGACG AGCTTCAGGA CCGGATTTAC
CTCCTCACAT CGAAGGAAGC TGGACGTGAC TACTAG
|
|---|
| Protein sequence | MSKKKRLLSW LCGALLLTSL SVVSSAPAQA AAGPGRCTGK FVNPITDICW SCLFPISIGG
LKIWPSSRPD PSNPALPVCL CGLRPGIAMG FWEPVRLADV SMKPWCFVNL GGMKLDPGFD
IGFKSMAGPS AVGGATQYNS QWHVHWYAYW FYCERPKTPE QNSPSPAPAA SATSQLDAIT
ATLRELKAKA ILEPTPANVT AYIRFQRAQL DRASLFSDVW QRAIWQDPEL DYTLQRPVST
LGKRQWQDSR SAERNAAMAQ LSERYGLFYF FAQSCGACEV MSPIVQSVAS TWHIAVRAIS
TDGGPSRHFP NYTVETNQRS RMGLEPKITP AVVLWDAQTG RPIPIGYGVM SADELQDRIY
LLTSKEAGRD Y
|
|---|
| |