Gene Saro_2157 details

Gene Information

• Locus tag: Saro_2157
• ID: 3918822
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2295859
• End bp: 2296431
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640444912
• Product: hypothetical protein
• Protein accession: YP_497430
• Protein GI: 87200173
• TIGRFAM ID: [TIGR02761] type IV conjugative transfer system protein TraE

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATTCCG ACATATCCCA CGAACGGCAG CAATCGCTGC TGCGCCAGCG GAACCTCTTT 
GCGCTCACCA GTGCCGGCCT TGGCCTTGCA CTGGTCGTCG CCGGGAGCCT TGCCGCCACC 
CGCGACCGCG AAGTGGTACT GGTTCCGACC GTTCCCAAAG CGCTCACCGT GAGCAGTGCC 
GGGGTCGAGG CCGATTATCT CGAGCTCGTC ACCCGCGATG CGGCCCTTGT TCTTCTCAAT 
CGCAGTCCGG AAGGCCTCGA TTACTGGATG AACGAGATCC TGAAGCTCGC TGATCCTGCA 
AGCTATGGCC GCCTCAAGGC CGAGCTCGTC CGGATCGTCG AAGAGCAGCG GGGCTCGGAT 
GTCACCCAGG CATTCGTGAT CCGGTCGATG ACTGTCGACC CGAAAGGCCT CACCTCGGAT 
GTGACGGGCA CGCTCAAGAC CTTCGTCGGC GCGCAGGTGA TTGCGAGTGA CGAACGCCGC 
TTCCGCTTCA GCTGGACTTA CCGCGGCCTG CGCCTCGCGC TCTCCGGGTT TGTGCAGCTC 
CCCCCACAGG AAAAATCCAA GGAGGCCCAG TGA 

 

Protein sequence

MYSDISHERQ QSLLRQRNLF ALTSAGLGLA LVVAGSLAAT RDREVVLVPT VPKALTVSSA 
GVEADYLELV TRDAALVLLN RSPEGLDYWM NEILKLADPA SYGRLKAELV RIVEEQRGSD 
VTQAFVIRSM TVDPKGLTSD VTGTLKTFVG AQVIASDERR FRFSWTYRGL RLALSGFVQL 
PPQEKSKEAQ