| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2147 |
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| Symbol | |
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| ID | 3918812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2289255 |
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| End bp | 2290436 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640444902 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_497420 |
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| Protein GI | 87200163 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTGG AAACTGGAAC GGATCCCAAA CGTCTCCTGA TCGGAGCGGC AGTGGCAACC
CTTATCGTCG GCACTGCGGG TATCATGCTC GGCCGCACCG TGCTTGCCCC CTCTCCAGCC
TCGACAGAGG CGGGGCCATC GGGCGAGGCG GAAGAAGAAG GCCACGTCGA AGGCCTGGTC
GAGATGGACG CCAAGCGTGC TGCATCGGCA GGCATTGTTA CCGAGACCGC GCAGGCTGGT
TCCCTCGGTG CCGAAATCCT CGCACAGGGC GTCGTCGCCC CGACGCCGGA TGGCGAAGCA
ATTCTCACTG CCCGCGCCGA TGGCGCGGTC GTGCGGATCG CCAAGGGTCT CGGCGACGCG
GTAGCTGCTG GCGAAACCAT TGCCTGGCTG GAGAGCCGGG ACGCAGCGGC GATTGCCGCT
GAGCGGAGTT CCGCCGCAGC GCGTGTTGCG CTCGCCCGAT CGACCTTCGA GCGCGAACGG
CGACTCTATG AGGCTAAGGT TACCGCGCGG CAAGATTTCG AAGCCGCCCG CGCCGCGCTG
GCTGAGGCGG AAGCCGAGAT GCGACGCAGC CAGTCGGCGG CGAGCGCGTC GAAAGTGTCC
GGCGATGGCC GGACCCTTGC CGTCACCAGT CTGATTGCGG GGCGGATCAC CAAGTCGGAT
GCGCGGCTCG GCGCCTACGT TTCCGCCGGC ACGGAGCTTT TCCGAGTCGC CGATCCTCGC
CGAATCCAGA TCAACGCCTC GGTGCTACCC GCCGATGCCC GCCGCGTCTC GCCTGGCGAC
CGCGCAGTCG TCGAGCTAGT CGGCGGGGAA ACCGTCGGTG CCACAGTTCG CTCGGCAACG
CCCAGCCTCG ATCCGGAAAG CAAGGTCGCG ACCCTCGTCC TCGTGCCGGA CAGCGGCGCT
CAACTCACTC CGGGCCAGGG GCTGCGTGTG CGGATCACCC CGCGTAATGC TGTTGCCACT
TCAAGCATCG GCCTGCCGGA CGAAGCGGTT CAGTCGGTCG AAGGGCGCGA TGTCGTCTTT
GTGAAGACCG CCAAGGGCTT CCAGGCCACG AACGTGACCG TGGGACAACG CAGCGCGGGC
CGTGTCGAGA TCGTTGCCGG TCTGAAGCCG GGCAGCGTGG TCGCGACGCG CGGCGCATTT
CTTCTGAAGG CCGAACTCGG CAAGGGCGAG GCGGAGCATT GA
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| Protein sequence | MDLETGTDPK RLLIGAAVAT LIVGTAGIML GRTVLAPSPA STEAGPSGEA EEEGHVEGLV
EMDAKRAASA GIVTETAQAG SLGAEILAQG VVAPTPDGEA ILTARADGAV VRIAKGLGDA
VAAGETIAWL ESRDAAAIAA ERSSAAARVA LARSTFERER RLYEAKVTAR QDFEAARAAL
AEAEAEMRRS QSAASASKVS GDGRTLAVTS LIAGRITKSD ARLGAYVSAG TELFRVADPR
RIQINASVLP ADARRVSPGD RAVVELVGGE TVGATVRSAT PSLDPESKVA TLVLVPDSGA
QLTPGQGLRV RITPRNAVAT SSIGLPDEAV QSVEGRDVVF VKTAKGFQAT NVTVGQRSAG
RVEIVAGLKP GSVVATRGAF LLKAELGKGE AEH
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