Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2137 |
Symbol | |
ID | 3918802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2277362 |
End bp | 2277895 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640444892 |
Product | sigma-24 (FecI-like) |
Protein accession | YP_497410 |
Protein GI | 87200153 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.61112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCCGCAC TGGCGCTCGC TGGTCGGCAA GACGCCTATC GCGAACTGCT GGCGCGCCAC CGTGAATCTG TATTTCGTCT GGTACGGGCA TCCGTCGGCG ATCCGCACGA GGCACTCGAC ATTACCCAGG AGACCTTCAT CGCCGCGTTC TCGGCGCTTG GACGCTACGA TCATGAGCGA CCGTTCCTGG CCTGGCTTAA GCACATCGCG CTCAACAAGT GCCGGGACTG GGCAAGAAGG AGAAAGGTGC GTGCCTTCTT CACGCGCGCA ATGCCGCTCG AGATGGCTTT CGATGTTTCG GACGATGCCA TTTCCGCCGA CGTACAAGCG GTGGACCGGG CCGAGCTGGC GCGCGTGACC GCGGCCATAT CGCGCTTGCC ATCCCGTCTG CGCGATGCCT TGGTCCTCCG CACGATCGAT GGGCTCGGCC AGGCTGAAGC CGCAGAGGTG CTGGGTGTCA GCGAAAAAAC GGTTGAGACC CGGCTCTACC GGGCGAGGGG AAAATTAAAA GCGATGCTTG GCGACCAGAT CTGA
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Protein sequence | MAALALAGRQ DAYRELLARH RESVFRLVRA SVGDPHEALD ITQETFIAAF SALGRYDHER PFLAWLKHIA LNKCRDWARR RKVRAFFTRA MPLEMAFDVS DDAISADVQA VDRAELARVT AAISRLPSRL RDALVLRTID GLGQAEAAEV LGVSEKTVET RLYRARGKLK AMLGDQI
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