Gene Saro_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2137 
Symbol 
ID3918802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2277362 
End bp2277895 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID640444892 
Productsigma-24 (FecI-like) 
Protein accessionYP_497410 
Protein GI87200153 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.61112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCGCAC TGGCGCTCGC TGGTCGGCAA GACGCCTATC GCGAACTGCT GGCGCGCCAC 
CGTGAATCTG TATTTCGTCT GGTACGGGCA TCCGTCGGCG ATCCGCACGA GGCACTCGAC
ATTACCCAGG AGACCTTCAT CGCCGCGTTC TCGGCGCTTG GACGCTACGA TCATGAGCGA
CCGTTCCTGG CCTGGCTTAA GCACATCGCG CTCAACAAGT GCCGGGACTG GGCAAGAAGG
AGAAAGGTGC GTGCCTTCTT CACGCGCGCA ATGCCGCTCG AGATGGCTTT CGATGTTTCG
GACGATGCCA TTTCCGCCGA CGTACAAGCG GTGGACCGGG CCGAGCTGGC GCGCGTGACC
GCGGCCATAT CGCGCTTGCC ATCCCGTCTG CGCGATGCCT TGGTCCTCCG CACGATCGAT
GGGCTCGGCC AGGCTGAAGC CGCAGAGGTG CTGGGTGTCA GCGAAAAAAC GGTTGAGACC
CGGCTCTACC GGGCGAGGGG AAAATTAAAA GCGATGCTTG GCGACCAGAT CTGA
 
Protein sequence
MAALALAGRQ DAYRELLARH RESVFRLVRA SVGDPHEALD ITQETFIAAF SALGRYDHER 
PFLAWLKHIA LNKCRDWARR RKVRAFFTRA MPLEMAFDVS DDAISADVQA VDRAELARVT
AAISRLPSRL RDALVLRTID GLGQAEAAEV LGVSEKTVET RLYRARGKLK AMLGDQI