Gene Saro_2116 details

Gene Information

• Locus tag: Saro_2116
• ID: 3917764
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2254975
• End bp: 2255550
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640444869
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_497389
• Protein GI: 87200132
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCTCT GGGTCGGCCT CGGAAATCCC GGACCGCAAT ATGCGCTCCA CCGGCACAAT 
GTCGGCTTCA TGGCGCTCGA CACTATTGCG GAGGTGCACA ATTTCGGCCC GGTCCAGAAG 
AAGTTCCAGG GCTGGTTGCA GGAGGGCCGC ATCGGCACCG AAAAGGTCCT GCTGCTCAAG 
CCCGCGACGT TCATGAACGA AAGCGGTCGT TCCGTCGGCG AGGCGATGCG CTTCTACAAG 
CTTGGGATGG ATGCTCTGGT CGTGTTCCAC GACGAGCTGG ACCTCGCCCC GTTCAAGGTG 
AAGGTGAAGC AGGGCGGCGG TACGGCGGGC CACAACGGAT TGCGTTCCAT CGACAAGCAC 
CTCGGGCCGG ACTTCCTGCG GGTGCGGCTC GGCATCGGCC ATCCCGGGCA CAAGGACCGG 
GTGACGGGCC ACGTCCTGGG CAACTTCGCC AAGTCCGAAC AGGACGATCT CGTCGACATG 
CTCGGCGCAA TTGCATCCGA AGCGGCCCTT TTAGCCAAGG GTGATAATGT ACTTTTCATG 
AATAACATTG CACTTCGTCA ACAAACGGCG GGGTGA 

 

Protein sequence

MQLWVGLGNP GPQYALHRHN VGFMALDTIA EVHNFGPVQK KFQGWLQEGR IGTEKVLLLK 
PATFMNESGR SVGEAMRFYK LGMDALVVFH DELDLAPFKV KVKQGGGTAG HNGLRSIDKH 
LGPDFLRVRL GIGHPGHKDR VTGHVLGNFA KSEQDDLVDM LGAIASEAAL LAKGDNVLFM 
NNIALRQQTA G