Gene Saro_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2111 
Symbol 
ID3917759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2248829 
End bp2251045 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content65% 
IMG OID640444864 
Productglycine--tRNA ligase 
Protein accessionYP_497384 
Protein GI87200127 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.541212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG CAGACTTCCT TCTCGAACTG CGCAGCGAGG AAATCCCGGC CCGCATGCAG 
GCGGGCGCCC GCGCCGATCT GGAAAAGCTG TTCCGCAAGG AGCTTGACGC CGCCGGCCTG
AAGGCGGGTG AGGTGACCGT GTGGTCCACG CCGCGCCGCC TCGCGCTGAT CGCGCGCGCT
CTGCCGCTGG CGACGGAAGC CGTGTCCGAG GAAGTAAAGG GGCCACGCAC CTCCGCGCCC
GAACAGGCAC TCGAAGGCTT CCTGCGCAAG ACCGGTCTGA CCAGGGACCA GTTGACCGAG
CGCGATGGCG TATGGTTTGC CGTGACGGAG AAGCCGGGAC GCGCAACCAG GGATGTGCTC
GCGGAAGCAG TCCCCGCGAT CATCCGCGCG TTCCCCTGGC CCAAGAGCCA GCGCTGGGGC
GCGGCTTCGC TCTCGACCGA GTCCTTGCGC TGGGTGCGTC CGCTCTCGGG CATCGTAGCG
ATCCTGGGCG ATGATCTGGT CGAGTGCGAG ATCGGGGCTG TGAAGTCCGG CTATGCCACG
CGCGGCCACC GCTTCCATTG CCCGGGCGAA ATCACCATCG GCAGCGCGCA CGACTATGCC
GACAAGCTCC GCGCCTGCCA CGTGATCGTC GATCACGTCG AGCGCGAGGC GATGGTGCGC
GACAAGGCCA AGGCTGCGGC AGAGGCCGCT GGCCTCGTGC TGGTCGAGGA CGAAGGTCTG
GTGATCGAGA ACGCGGGCCT CACCGAATGG CCGGTCCCGC TGCTCGGCCG CTTCGACGAG
GCGTTCCTCG ACGTGCCGCC CGAAGTCATC CAGCTCACCG CCCGCGTCAA CCAGAAGTAC
TTCATCTGCC GTGACAGCGC CGGAAAGCTC GCCAACGCCT TCGTCTGCAC CGCGAACATC
GAGGCCAAGG ACGGCGGCGC CGCCATCGTC GACGGCAACC GCAAGGTGCT GGCGGCACGC
CTCTCCGACG CCCGCTTCTT CTGGGAGCAG GACAAGAAGA AGCCGCTCGC CGAACAGGCG
CAGAAGCTCT CTCGCATCAC CTTCCACGAA AAGCTCGGCA CCGTCGCGGA CAAGGTTCAG
CGCGTCGTCA AGCTGGCCGA GTGGCTGGCA AGCGAAGGCA TCGTGCCGAA CTGCGATCCC
GCTCTGGCGC GGCAGGCTGC GGAACTGTGC AAGGCCGATC TCGTCACCGA AATGGTCGGC
GAATTCCCCG AACTCCAGGG CCTGATGGGC GGCTACTACG CCCGCGCCGA AGGTCTGCCC
GATGCCGTGG CAGATGCCAT CCGCGATCAC TACAAGCCGG TCGGGCAGGG CGATGACGTG
CCGACCGCGC CGGTAACGGT GGCAGTGGCG CTGGCGGATA AACTGGATAC GTTGGTCGGG
TTCTTCCTAA TTGATCAGCG CCCCACAGGA TCGCGAGACC CGTTTGCGCT TCGACGTGCA
GCTCTTGGCG TGCTCGAACT TCTCAACTGG GGTTCACTGC GCGTCTCGAT GTGGGAGGCA
ATTGCGAAGG CACTCGCCGC ATTTACAAAG CAGCTTGTTT CTGACGACAT GGCGGAAGCT
TCCTATGAAG CTTTTCAAAC AAACCAGAAG GCAGTGTTTA CGACACTTCC TGACTTCTTC
GCCGACCGCC TCAAAGTCCA GCAACGCGAA GCAGGTGTCC GCCACGACCT GATCGATGCC
GTGTTCGCGC TTGGAGGCGA GGACGATCTC GTCCGCCTGC TTGCCCGCGT CCATGCGCTT
CAGGCCTTCG TCGGCACCGA GGACGGCACC AACCTGCTCG CAGGCTACAA GCGCGCCGCC
AACATCCTCA AGAAGGAAGG CTTCGCCGCC AACCCCAACG CCGGGTCCGA AGGCGAGGGC
GTGGTTCCGC CGACGGGCGA GGAAGATCCG CTGGTGCTGG TCGACGATCC GGCGATGGAA
GGCGTCGTCG CGCAGTTCTC GCACCCCGAA TGCAACTACC AGCGCGAACC TGCCGAGCAG
GCGCTCGTCG ATGCGCTGGA CTACGCAGAA CCAGCGGCAC GTGGTGCGGT CGAAAGTGAA
GATTTCGATT TCGCCATGCG GGTGCTCGCC TCGCTTCGCG CGCCCATCGA CTCCTTCTTC
GATCAGGTCA CGGTCAATGA TGCGGATGCT AACAAGCGTT CCAGTCGCCT TGCCCTGCTC
GACCGGTTCC GTGCTGCGGT GCACAAAGTT GCGGACTTTT CGCGCATAGA AGGCTAA
 
Protein sequence
MTTADFLLEL RSEEIPARMQ AGARADLEKL FRKELDAAGL KAGEVTVWST PRRLALIARA 
LPLATEAVSE EVKGPRTSAP EQALEGFLRK TGLTRDQLTE RDGVWFAVTE KPGRATRDVL
AEAVPAIIRA FPWPKSQRWG AASLSTESLR WVRPLSGIVA ILGDDLVECE IGAVKSGYAT
RGHRFHCPGE ITIGSAHDYA DKLRACHVIV DHVEREAMVR DKAKAAAEAA GLVLVEDEGL
VIENAGLTEW PVPLLGRFDE AFLDVPPEVI QLTARVNQKY FICRDSAGKL ANAFVCTANI
EAKDGGAAIV DGNRKVLAAR LSDARFFWEQ DKKKPLAEQA QKLSRITFHE KLGTVADKVQ
RVVKLAEWLA SEGIVPNCDP ALARQAAELC KADLVTEMVG EFPELQGLMG GYYARAEGLP
DAVADAIRDH YKPVGQGDDV PTAPVTVAVA LADKLDTLVG FFLIDQRPTG SRDPFALRRA
ALGVLELLNW GSLRVSMWEA IAKALAAFTK QLVSDDMAEA SYEAFQTNQK AVFTTLPDFF
ADRLKVQQRE AGVRHDLIDA VFALGGEDDL VRLLARVHAL QAFVGTEDGT NLLAGYKRAA
NILKKEGFAA NPNAGSEGEG VVPPTGEEDP LVLVDDPAME GVVAQFSHPE CNYQREPAEQ
ALVDALDYAE PAARGAVESE DFDFAMRVLA SLRAPIDSFF DQVTVNDADA NKRSSRLALL
DRFRAAVHKV ADFSRIEG