Gene Saro_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2108 
Symbol 
ID3917756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2244411 
End bp2245220 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content69% 
IMG OID640444861 
Productphosphoribosyltransferase 
Protein accessionYP_497381 
Protein GI87200124 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.227962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTGG GCATGTCCTG GCTGTCCGCG CTCGACCCGG TGCTGGACTT CGTGTTTCCC 
CCGCGCTGCC CGCTGTGCGG CGCGCCGGTC GCCGCGCATG GCGGCCTGTG CATGGCATGC
TGGGACAAGC TGGAGACGCC ATCGGGCGTA GCCTGCCGTT CGTGCCAGCG CCCGATGGGC
GGTAGCGACG ATGCGCACGC GGAACTGGTC TGCGCGCCGT GCATGGCCGA CCCTCCCCGC
CATTCAGGCA TCGCGGCGGC AACGCTCTAC AACGATGCCT CGCGCGCGCT CGTGCTGGCG
TTCAAGCATG GGCGGCGGAT CGGGCTTGCT CCCATGATGG CGCGCATGAT CGGCCACCGC
GTCCCGGCGC TCGAGGGGGA CTGGCTGGTC GTGCCGGTGC CGTTGCATCG CTGGCGGCTG
ATGCAGCGCG GGTTCAACCA GTCCGCATTG CTCGCGCGGC ATCTGGCCGA ATCGACCGGA
CAGAAACTGT TGGTCGACGG CCTCGTGCGC ACCAGGGCGA CACCATCGCT CGGGGGCCTG
AACCGCAACA AGCGCGCGAG GGCGCTGGCC GGATCGATCA GCGTCCACCC TGGGCGCGCG
GACTGCTTGC GGCAGGCGAA GGTCCTGCTG GTCGATGACG TGATGACCAG CGGCGCCACT
ACCAACGCCT GCATCACCGC CTTGCGCAGG GCAGGAGTCG CCGAAGTGCG AATCGCGTGT
TTCGCTCGCG TGCTTGACGA GGCGCTCGGT TCATCGAGGA GCGATGCTTC TGCGGTGTTG
CCGGACGCTG GCGGCGAATT GCGCGCCTGA
 
Protein sequence
MSLGMSWLSA LDPVLDFVFP PRCPLCGAPV AAHGGLCMAC WDKLETPSGV ACRSCQRPMG 
GSDDAHAELV CAPCMADPPR HSGIAAATLY NDASRALVLA FKHGRRIGLA PMMARMIGHR
VPALEGDWLV VPVPLHRWRL MQRGFNQSAL LARHLAESTG QKLLVDGLVR TRATPSLGGL
NRNKRARALA GSISVHPGRA DCLRQAKVLL VDDVMTSGAT TNACITALRR AGVAEVRIAC
FARVLDEALG SSRSDASAVL PDAGGELRA