Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2102 |
Symbol | |
ID | 3917750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2238258 |
End bp | 2239541 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640444855 |
Product | major facilitator transporter |
Protein accession | YP_497375 |
Protein GI | 87200118 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0117925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCACTT CCGCGCCAGT TCCAGCCTCG CCCCTCGCCA TTCCGGACTA CCGCCGCTTC TGGATCGCGC GGTTCTTCTC GGTCGTGGCG ACTTCGGGCA TGGTCGTCAT TCTCGGCTAC CAGCTCTATG ACGTGGCGCG CGGGCAGTAC GGCATGTCCA TCGCGCAGGC CGCTTTCCAG CTCGGCCTGC TGGGCCTCGC GCAGTTCCTG CCGCTGTTCC TGCTGACACC GATCGCGGGC GTCATCGCGG ACCGGTTCGA CCGGCGCAAC GTCGCGGGCC TTTCGATCTG CCTCGACCTT ACCATCGCCC TGACGCTGGC GATCTGCACG GCGAACGGGG TGCTGTCGCT CCCGCTGCTG TTCGGCCTTG CCGCACTTCA CGGCACCGCG CGAGTGTTCA TCGGCCCCGC GCTCGCCTCC ATTGCGCCAA ACATCGTACC CGCCGAACTC ATGCCAAAGG CCGTCGCGAT CAATTCGATG GCGTGGCAGA CCGGATCGGT CGGCGGCCCG GCAATAGCGG GACTGCTCTT TGCGGGGCAC CCGGCACTGC CCTACTGGAC GTCGACCGCG TTGCTCGCGC TGTCGGCGGT CTGCGCCTTC GGCATCCGCC GCCTGCCCCC GCCGCCCGGC AACCGCGACG TCCACCCGAT CCGCCAGATC CGTGAAGGGC TGTCGTTCGT GTGGAACGAC CGCTTCCTGC TGGGCTGCGT CACGCTCGAC CTGTTCGCGG TGCTGCTGGG GGGCGCGACC GCGCTGCTGC CGGTCTTCGC CCGCGACATC CTGTTCATCG ACGGACACCC GGTGGGCGCG GACGGCCTTG GCATAATGCG CGCCATGCCG GGCCTTGGCG CGGCGCTTGT CGCGTTCGTC CTCTCGCGCA GGCCCATCGC CACCAACGTC GGCAACAAGA TGCTGCTGGG CGTCGTAATC TACGGCCTGT TCACCATCGG CTTCGGCCTT TCGTCGAACT TTTACCTGTC GCTCGTCATG CTCATGGGGC TTGGCGCGGG CGACATGGTC TCGGTCTTCA TCCGCAACAC GCTGGTCCAG TTGCACACCC CCGACGAAGT GCGCGGGCGG GTCTCGTCGA TCTCGGGCCT CGCCATTTCG GCGTCGAACG AGCTGGGCGA GATGCAATCT GGCGTGGCCG CCGCGCTTCT GGGCGCCGTG GGCGCGGTCG TGTTCGGCGG GGTCAGCGCC GTCGCCGTGA CGGCAGCATG GTTTTTCCTT TTCCCGGAAC TGAAGAACGC GCGAACCTTT GCAGCGCGAT ACAGATCGGC CTAA
|
Protein sequence | MTTSAPVPAS PLAIPDYRRF WIARFFSVVA TSGMVVILGY QLYDVARGQY GMSIAQAAFQ LGLLGLAQFL PLFLLTPIAG VIADRFDRRN VAGLSICLDL TIALTLAICT ANGVLSLPLL FGLAALHGTA RVFIGPALAS IAPNIVPAEL MPKAVAINSM AWQTGSVGGP AIAGLLFAGH PALPYWTSTA LLALSAVCAF GIRRLPPPPG NRDVHPIRQI REGLSFVWND RFLLGCVTLD LFAVLLGGAT ALLPVFARDI LFIDGHPVGA DGLGIMRAMP GLGAALVAFV LSRRPIATNV GNKMLLGVVI YGLFTIGFGL SSNFYLSLVM LMGLGAGDMV SVFIRNTLVQ LHTPDEVRGR VSSISGLAIS ASNELGEMQS GVAAALLGAV GAVVFGGVSA VAVTAAWFFL FPELKNARTF AARYRSA
|
| |