| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2085 |
|---|
| Symbol | |
|---|
| ID | 3917733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 2221892 |
|---|
| End bp | 2222962 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640444838 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_497358 |
|---|
| Protein GI | 87200101 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.137371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTCCCA AGGGTCCGGC CGGCCCTGCT CCGGAACCGA CCGAGAAGGC CCCGGACGCC
AATGTCCTGC CGACCGACGC GGGCCGTCAC CGCGTGGCGC TGCTCGTGCC GCTGACCGGG
GCCAACGCCG CTGTCGGCCA GTCCATCGCC AATGCCGCGA CGATGGCCCT GCTCGATACC
AACGCCGCCA ACATGCGCAT CACCACCTAC GACACGGCCA GCGGCGCCGG CTCGGCCGCG
AGCCGGGCCA TTTCGGACGG CAACAAGCTG ATCCTCGGCC CGCTTCTCGG TAACGACGTC
GTACTCGTCA GCAATGTCGC CCGGCCCGCC AAGGTGCCGA TGATCACCTA TTCCAACGAC
AGCGCGGTCG CCTCGCGCGA TGTCTTCGTC ATGGGCCAGG CCCCCGGCCA GTCGGTCGCC
CGCGTACTCG GCTTCGCCAA GTCGAAAGGC ATCGGTTCGG TCGCCGCGAT CATCCCGACG
GGCGACTACG GCCAGCGCGC GATGAACGCG GTCGTCGATT CCGGCCGCGC CCTCGGCGTC
ACGGTCACCG CCATCGAGAC CTACGACCGC GGCAATACCT CGGTCGCCAG CGCCGTGCGC
CGGGTCAAGG AGAAGGGCCG CTTCGACGCC CTGCTCATTG CCGACGGCAG CCGCATAGCG
CTTCAGGCCG CCCCGCTCGC CGGCAAGGGC GTCAAGCTGC TCGGTACCGA ACTGTGGAGC
GGCGAAGCGG CGATCGCCAA GAGCCCCGCC ACGCGCGGCT CATGGTTCGC CGCCGTTTCG
GACGGGCGCT TCGGCCAGTT CGAGAAGTCC TACCGCACCC GCTTCGGCGC CACCCCCTCG
CGGCTGGCAA CGCTCGGCTA CGACAGTGTC CTGCTGACGC TGAACGTCGC GCGCAACTGG
AAGCCGGGAA CGACCTTCCC CACCGCCAAA CTCTACGATC CGCAGGGCTT CATCGGCCTC
GACGGCGTCT TCCGCTTCAC CGCCTCGGGC ATGGCAGAGC GGGCGATGGA AGTGCGCGAA
GTCGGCGCGG GCACCTTCAC CACCGTTTCC CCCGCTCCTG CAAAGTTCTG A
|
|---|
| Protein sequence | MIPKGPAGPA PEPTEKAPDA NVLPTDAGRH RVALLVPLTG ANAAVGQSIA NAATMALLDT
NAANMRITTY DTASGAGSAA SRAISDGNKL ILGPLLGNDV VLVSNVARPA KVPMITYSND
SAVASRDVFV MGQAPGQSVA RVLGFAKSKG IGSVAAIIPT GDYGQRAMNA VVDSGRALGV
TVTAIETYDR GNTSVASAVR RVKEKGRFDA LLIADGSRIA LQAAPLAGKG VKLLGTELWS
GEAAIAKSPA TRGSWFAAVS DGRFGQFEKS YRTRFGATPS RLATLGYDSV LLTLNVARNW
KPGTTFPTAK LYDPQGFIGL DGVFRFTASG MAERAMEVRE VGAGTFTTVS PAPAKF
|
|---|
| |