Gene Saro_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2077 
Symbol 
ID3917725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp2216103 
End bp2216555 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content65% 
IMG OID640444830 
Product3-dehydroquinate dehydratase 
Protein accessionYP_497350 
Protein GI87200093 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.556948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAG CTGGCGGCGC CGGCACGACC GTGTTCGTGC TCAATGGCCC GAACCTCAAC 
CTGCTGGGCC TGCGCGAGCC CGAGATCTAC GGATCGCAGA CGCTCGACGA CATCGCCGGA 
ATGCTCGAGG ATCGCGCCCG GGAACTGGGC CTCGAAATCG ACATGCGCCA ATCGAACCAC 
GAAGGGCACC TCGTCGACTG GCTGCACGAA GCGCAGGCGA CGGGCGCGAA GGCCGTGCTG 
GTCAACGCGG GCGCCTACAC CCACACCTCT GTCGCGCTTC ACGATGCGAT CAAGGCAATC 
AAGGTGCCGG TGATCGAAGT CCACCTTTCG AACCCGCACA CGCGCGAAGG CTTCCGCCAC 
AAATCCTATG TCGGCATGGC AGCCAAGGGC ACCGTCGCCG GCTTCGGCGC GAACAGCTAC 
GTGGTGGCTC TCGAAGCCGT CGCACGGCTC TGA
 
Protein sequence
MTEAGGAGTT VFVLNGPNLN LLGLREPEIY GSQTLDDIAG MLEDRARELG LEIDMRQSNH 
EGHLVDWLHE AQATGAKAVL VNAGAYTHTS VALHDAIKAI KVPVIEVHLS NPHTREGFRH 
KSYVGMAAKG TVAGFGANSY VVALEAVARL