Gene Saro_2058 details

Gene Information

• Locus tag: Saro_2058
• ID: 3917705
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2198985
• End bp: 2199662
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640444810
• Product: isochorismatase hydrolase
• Protein accession: YP_497331
• Protein GI: 87200074
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1335] Amidases related to nicotinamidase

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACATG CCGTCGATCA CCACGCAATT CTCGCCCGCT TCGCACCTTC ACGGGGCGGC 
GACGGCAACA TCTTCCGCGA CATCGATCCG TCCCGGCTCG CCCATATAGT GGTCGACATG 
CAGAACGGCT TCATGGAGGA AGGCGCACCG GTCGAGGTGC CGGTGGCGCG CACCATCGTG 
GACAACATCA ACCGCATCTC GGCCGCCGTC CGCGATGCCG GCGGGCACAA CGTCTTCCTG 
CGCTACACGA CCCCGCCCGA AGGCGGCCCA AGCTGGTCGA ACTTCATGGT GCGCATGGGC 
CGCGAGGCGC AAGGCCACCG CGAAGCCTTC ACGCCGGGCG CGCACCACTG GCAGCTCTGG 
CCGACGCTGG ACGTCCGAGA AGCCGACGCA ATCGTCGACA AGCACCGCTT CAGCGGCTTC 
ACGCCGGGCA CCTGCGCCCT GAAAGACGTC CTCGACGCGC GCGGCATCGA CACCGTGCTC 
ATCACCGGCA CGCTCACCAA CTGCTGCTGC GAAAGCACCG CCCGCGACGC GATGCAGCAC 
AATTACCGCG TGCTGATGGC GAGCGACGCC AACGCTGCCC TCTCGGACGA GGAACACGCC 
GCCACCCTGC ACATCATGGC CATGGTCTTC GCCGATCTCC ACTCGACGCA GGAAGTCGTC 
GACCTGCTGG GCAGCTGA 

 

Protein sequence

MPHAVDHHAI LARFAPSRGG DGNIFRDIDP SRLAHIVVDM QNGFMEEGAP VEVPVARTIV 
DNINRISAAV RDAGGHNVFL RYTTPPEGGP SWSNFMVRMG REAQGHREAF TPGAHHWQLW 
PTLDVREADA IVDKHRFSGF TPGTCALKDV LDARGIDTVL ITGTLTNCCC ESTARDAMQH 
NYRVLMASDA NAALSDEEHA ATLHIMAMVF ADLHSTQEVV DLLGS