Gene Saro_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2043 
SymbolpanB 
ID3917690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2181011 
End bp2181880 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID640444795 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_497316 
Protein GI87200059 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACGA CCTTCCAGCT CGATACCTCG ACAAGCCGTG CCAACCCCAC CCCGGCACCG 
ATGAAGCGCC TGACGATCCC CGCGATCCGC CAGCGCAAGA AGGACGGCGT GACGGCACAA
CCGGTCGTGA TGCTCACCGC CTATACCGCC CGTCAGGCGC AATTGCTCGA CGCCCATTGC
GATCTGCTGC TGGTCGGGGA TTCCCTTGGC CAGGTGATCT ATGGCCTGCC TTCCAGCGTT
CCGGTCACGC TCGACATGAT GGCAGCCCAT GGCGCGGCGG TCGTGCGTGG ATCGTATCAC
GCGGCGGTCG TGGTCGACAT GCCGTTCGGC AGCTACGAAG CATCGCCGCA GCAGGCCTTC
GAAAGCGCCT CGCGGCTGCT GAAGGAAACC GGTTGCGCGG CAGTGAAGCT CGAAGGGGGC
GAGGCCATGG CCGAAACGGT CGCGTTCCTC ACCAACCGGG GCATCCCGGT CATGGGCCAC
GTCGGCCTCA CCCCGCAGGC GGTCAATGTG CTGGGCGGCT ACAACGCGCG CGGCCGCAGC
GAGGCCGAAG CGGCCAAGAT CGTCGGAGAC GCACGGTCGC TTGCCGATGC CGGTGCCTTC
GCCATCGTGA TCGAAGGCGT GGTCGAGCCC ATCGCGATTG CCATCACCCA GGCCGTGGCG
TGCCCGACAA TCGGCATCGG CGCCTCGGCT CAATGCGACG GGCAGGTTCT GGTCACCGAA
GACATGCTCG GCATGTTCGA GCGCGTTCCG CGGTTCGTGA AGATCTACGA GGATCTCGCC
GGGACCATCT CCGGGGCTGC GGCGCGTTAT GCCGACGAAG TGCGCGCGCG CACCTTCCCC
GGTATTGAAC AGACGTACCA GCCCAAGTAA
 
Protein sequence
MSTTFQLDTS TSRANPTPAP MKRLTIPAIR QRKKDGVTAQ PVVMLTAYTA RQAQLLDAHC 
DLLLVGDSLG QVIYGLPSSV PVTLDMMAAH GAAVVRGSYH AAVVVDMPFG SYEASPQQAF
ESASRLLKET GCAAVKLEGG EAMAETVAFL TNRGIPVMGH VGLTPQAVNV LGGYNARGRS
EAEAAKIVGD ARSLADAGAF AIVIEGVVEP IAIAITQAVA CPTIGIGASA QCDGQVLVTE
DMLGMFERVP RFVKIYEDLA GTISGAAARY ADEVRARTFP GIEQTYQPK