Gene Saro_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2029 
Symbol 
ID3917676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2162774 
End bp2163478 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID640444781 
ProductLexA repressor 
Protein accessionYP_497302 
Protein GI87200045 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACGC GCAAGCAGCA TGAACTGCTC ACCTTCATCC AGACCCGGCT GGAAGATTCC 
GGTATCTCGC CCTCGTTCGA GGAGATGAAG GAAGCGCTCG ACCTCAAGTC GAAGTCCGGC
GTCCACCGCC TGATCTCTGC GCTCGAGGAA CGCGGCTTCA TCCGCCGCCT GCCCAACCGC
GCCCGCGCGC TCGAAGTCCT GCGCCAGCCC GATAGCGCCG TTGGCAAGGC CGCGCCTGTT
TCGCAGCGCG AGGCGGCGAA CACGAATTCC GCCCTTCCCC CGCTGCGCGC CGCGCCCAAG
GCTGCACCTG CGCCGGCGAA CGACGTGATC GAACTGCCGC TCCACGGCAA GATCGCCGCG
GGCGTCCCGA TAGAAGCGCT GGAAACCACG GCAACGTTGC CGGTCCCGGC GGCCCTGCTC
GGCGCCGGCG AACACTATGC GCTCGAAGTT TCCGGTGATT CCATGGTCGA AGCCGGCATC
TTCGATGGCG ACTATGCCCT CGTCCGCAAG ACCGACGTTG CGCGCGACGG CGAAATCGTG
GTTGCGCTCG TTCGCGGAGA GGAAGCGACG CTGAAGTACC TGCACCGCGA AAAGGGCATG
GTCCGCCTCG ATCCTGCGAA TGCGGCCTAC GACCCGCAGT ATTACCGCCC GGAAGAAGTG
GCCGTGCAGG GCAAGCTCGC CGGATTGCTG CGCCGCTACC ATTGA
 
Protein sequence
MLTRKQHELL TFIQTRLEDS GISPSFEEMK EALDLKSKSG VHRLISALEE RGFIRRLPNR 
ARALEVLRQP DSAVGKAAPV SQREAANTNS ALPPLRAAPK AAPAPANDVI ELPLHGKIAA
GVPIEALETT ATLPVPAALL GAGEHYALEV SGDSMVEAGI FDGDYALVRK TDVARDGEIV
VALVRGEEAT LKYLHREKGM VRLDPANAAY DPQYYRPEEV AVQGKLAGLL RRYH