Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2024 |
Symbol | trpC |
ID | 3917345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2157759 |
End bp | 2158547 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640444776 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_497297 |
Protein GI | 87200040 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACA AGCTCACCGA AATCTGCGAT ACCAAGCGCA ATGAAGTCGC CGCCCGCAAG GGCGCTGTCA CCGTCAGCGA ACTCACCGCC CGCGCCAGCG AACAGAGCGC GCCGCGCGGC TTCGAAAAAG CCCTGCGCGG CAAGGCCGCC GAAGGCTTCG CGCTCATCGC CGAAATCAAG AAGGCCAGCC CCTCCAAGGG TCTGATCCGC CCGGATTTCC GTCCGGCCGA TCACGCCCGC GCCTATCAGG CCGGCGGCGC GGCCTGCCTC TCGGTCCTCA CCGATGCACC CTATTTCCAG GGCCACGAGG ATTTCCTCGT CGAAGCGCGC GCAGCCTGCA CGCTCCCGGT GATCCGCAAG GATTTCATGG TCGATCCATG GCAGTGCCTT GAAGCGCGCG CCATCGGCGC CGACGCCATC CTCATCATCG TCGCCGCCCT GTCCGACCAG CAGATGGCCG AAATCGAGGC CGCGGCCCTC GAACAGGGCA TGGATGCACT TGTCGAAGTC CACAACGAGG AAGAGATGGA GCGCGCCGCC CGCCTGCGGT CGCGCCTGAT CGGGGTCAAC AACCGCGATC TCAAGCGCTT CGTGACCGAC CTCGCCACGA CCGAACGCCT CGCCCCCCTC GCTCCGGATG GCACCCTGCT GGTTGCCGAA AGCGGTATCA ACACCCACGC CGACTTGCTT CGCCTCGAAA AGTGCGGCGC CCGCACGTTT CTCGTCGGCG AAAGCCTGAT GCGCCAGGCC GACGTCGAAG CGGCAACGCG CGGACTGTTG TTCGGTTAG
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Protein sequence | MTDKLTEICD TKRNEVAARK GAVTVSELTA RASEQSAPRG FEKALRGKAA EGFALIAEIK KASPSKGLIR PDFRPADHAR AYQAGGAACL SVLTDAPYFQ GHEDFLVEAR AACTLPVIRK DFMVDPWQCL EARAIGADAI LIIVAALSDQ QMAEIEAAAL EQGMDALVEV HNEEEMERAA RLRSRLIGVN NRDLKRFVTD LATTERLAPL APDGTLLVAE SGINTHADLL RLEKCGARTF LVGESLMRQA DVEAATRGLL FG
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