Gene Saro_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2024 
SymboltrpC 
ID3917345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2157759 
End bp2158547 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID640444776 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_497297 
Protein GI87200040 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA AGCTCACCGA AATCTGCGAT ACCAAGCGCA ATGAAGTCGC CGCCCGCAAG 
GGCGCTGTCA CCGTCAGCGA ACTCACCGCC CGCGCCAGCG AACAGAGCGC GCCGCGCGGC
TTCGAAAAAG CCCTGCGCGG CAAGGCCGCC GAAGGCTTCG CGCTCATCGC CGAAATCAAG
AAGGCCAGCC CCTCCAAGGG TCTGATCCGC CCGGATTTCC GTCCGGCCGA TCACGCCCGC
GCCTATCAGG CCGGCGGCGC GGCCTGCCTC TCGGTCCTCA CCGATGCACC CTATTTCCAG
GGCCACGAGG ATTTCCTCGT CGAAGCGCGC GCAGCCTGCA CGCTCCCGGT GATCCGCAAG
GATTTCATGG TCGATCCATG GCAGTGCCTT GAAGCGCGCG CCATCGGCGC CGACGCCATC
CTCATCATCG TCGCCGCCCT GTCCGACCAG CAGATGGCCG AAATCGAGGC CGCGGCCCTC
GAACAGGGCA TGGATGCACT TGTCGAAGTC CACAACGAGG AAGAGATGGA GCGCGCCGCC
CGCCTGCGGT CGCGCCTGAT CGGGGTCAAC AACCGCGATC TCAAGCGCTT CGTGACCGAC
CTCGCCACGA CCGAACGCCT CGCCCCCCTC GCTCCGGATG GCACCCTGCT GGTTGCCGAA
AGCGGTATCA ACACCCACGC CGACTTGCTT CGCCTCGAAA AGTGCGGCGC CCGCACGTTT
CTCGTCGGCG AAAGCCTGAT GCGCCAGGCC GACGTCGAAG CGGCAACGCG CGGACTGTTG
TTCGGTTAG
 
Protein sequence
MTDKLTEICD TKRNEVAARK GAVTVSELTA RASEQSAPRG FEKALRGKAA EGFALIAEIK 
KASPSKGLIR PDFRPADHAR AYQAGGAACL SVLTDAPYFQ GHEDFLVEAR AACTLPVIRK
DFMVDPWQCL EARAIGADAI LIIVAALSDQ QMAEIEAAAL EQGMDALVEV HNEEEMERAA
RLRSRLIGVN NRDLKRFVTD LATTERLAPL APDGTLLVAE SGINTHADLL RLEKCGARTF
LVGESLMRQA DVEAATRGLL FG