Gene Saro_2023 details

Gene Information

• Locus tag: Saro_2023
• Symbol: trpD
• ID: 3917344
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 2156671
• End bp: 2157663
• Gene Length: 993 bp
• Protein Length: 330 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640444775
• Product: anthranilate phosphoribosyltransferase
• Protein accession: YP_497296
• Protein GI: 87200039
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0547] Anthranilate phosphoribosyltransferase
• TIGRFAM ID: [TIGR01245] anthranilate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTGC TCCCCGATCC CCAGCACCCG CTAGAGGAAG CCGAGGCCGA AGCCGCCTTT 
GCCGCGATTC TCGATGGCGC CGTGGCGGAT GAAGCCATCG CCCGGTTTCT CGTGGGCCTG 
TCCGACCGTG GCGAGAACGC CAGCGAGATC GCCGGCGCCG CCCGGGCCAT GCGCGCCCGG 
ATGATCCCGA TCAAGGCGCC CGCAAACGCC ATCGACGTCT GCGGCACCGG CGGCGACGGG 
CATCACACGC TCAACGTCTC CACCGCCGTC AGCCTCGTCG TCGCCGCCTG CGGCGTGCCC 
GTCGCCAAGC ACGGCAACCG CGCCGCCAGT TCCAAGGCCG GCGCCGCCGA TACCCTCGAA 
GCCCTGGGCC TCAATCTCGA CCGCGCCGCC GAAACCGCCG AAGAGACGTT GGCCGACCTC 
GGCATCTGCT TCCTCTTCGC CGCGCGTCAT CACCCGTCGA TGGGCCGTAT CATGCCCATC 
CGCAAGGCGC TCGGCCGCCG CACCATCTTC AACCTGATGG GGCCGCTCGC CAATCCCGCC 
AACGTGCGCC GCCAGCTCGT CGGCATCGCG CGTCCGGCCT ATGTCCCGAT CTATGCCGAA 
GCCATCCTGC GCCTCGGCAC CGATCACAGC TTCGTCATTT CCGGCGATGA GGGGCTCGAC 
GAACTGAGCC TTGCCGGCGG CAACGAACTG GCCGAAGTGC GCGACGGCGA AATCTCCATG 
CGCCGCGTAA CGCCTGCGGA CGCCGGCCTG CCCGAAAGCG CGGTCACCGC GATCCGTGGC 
GGCGACGCGG CCCATAACGC CCGCGCCCTG CGCGCCCTCC TCGAAGGCGA GCACGGTCCC 
TACCGCAACG CCGTGCTCTT CAACGCCGCC GCCGCGCTCA TCATCGCGGG CGAGGCGCAG 
GACTGGCACG AAGGCGTCGA GGAAGCAGCC GAAGCCATCG ACAAGGGCCT TGCCAACGCC 
CTTCTCAACT GCTGGATCGC CGCTCTCGAA TAG 

 

Protein sequence

MTLLPDPQHP LEEAEAEAAF AAILDGAVAD EAIARFLVGL SDRGENASEI AGAARAMRAR 
MIPIKAPANA IDVCGTGGDG HHTLNVSTAV SLVVAACGVP VAKHGNRAAS SKAGAADTLE 
ALGLNLDRAA ETAEETLADL GICFLFAARH HPSMGRIMPI RKALGRRTIF NLMGPLANPA 
NVRRQLVGIA RPAYVPIYAE AILRLGTDHS FVISGDEGLD ELSLAGGNEL AEVRDGEISM 
RRVTPADAGL PESAVTAIRG GDAAHNARAL RALLEGEHGP YRNAVLFNAA AALIIAGEAQ 
DWHEGVEEAA EAIDKGLANA LLNCWIAALE